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  5. Als_g27825

Als_g27825 (GCP1)


Aliases : GCP1

Description : mitochondrial tRNA threonylcarbamoyl transferase & original description: none


Gene families : OG0004465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004465_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g27825

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00021300 GCP1,... RNA processing.RNA modification.tRNA... 0.02 OrthoFinder output from all 47 species
AT2G45270 GCP1 glycoprotease 1 0.03 OrthoFinder output from all 47 species
Aop_g38836 GCP1 mitochondrial tRNA threonylcarbamoyl transferase &... 0.02 OrthoFinder output from all 47 species
Cre14.g615500 GCP1 RNA processing.RNA modification.tRNA... 0.02 OrthoFinder output from all 47 species
Cre15.g639400 GCP1 RNA processing.RNA modification.tRNA... 0.01 OrthoFinder output from all 47 species
LOC_Os12g29990.1 GCP1, LOC_Os12g29990 mitochondrial tRNA threonylcarbamoyl transferase 0.02 OrthoFinder output from all 47 species
Spa_g16171 GCP1 mitochondrial tRNA threonylcarbamoyl transferase &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000905 Gcp-like_dom 112 415
No external refs found!