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  5. Als_g24550

Als_g24550


Description : not classified & original description: none


Gene families : OG0006589 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006589_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g24550

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00160p00077470 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g15038 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04722.t1 Aspi01Gene04722 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0093.g043217 No alias not classified & original description: CDS=114-1595 0.03 OrthoFinder output from all 47 species
Cba_g22594 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.19G077100.1 Ceric.19G077100 not classified & original description: pacid=50576551... 0.07 OrthoFinder output from all 47 species
Dde_g25576 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g04647 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
LOC_Os05g31680.1 LOC_Os05g31680 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g27807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435866g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g25426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08323 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g42608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006262 No alias not classified & original description: CDS=1-1434 0.04 OrthoFinder output from all 47 species
Sam_g11147 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g13021 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g13049 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e018381_P001 Zm00001e018381 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e026859_P001 Zm00001e026859 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!