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  5. Als_g22121

Als_g22121


Description : polynucleotide kinase involved in ITS2 rRNA removal *(GRC3) & original description: none


Gene families : OG0006547 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006547_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g22121

Target Alias Description ECC score Gene Family Method Actions
Adi_g015369 No alias polynucleotide kinase involved in ITS2 rRNA removal... 0.03 OrthoFinder output from all 47 species
Ala_g15851 No alias polynucleotide kinase involved in ITS2 rRNA removal... 0.03 OrthoFinder output from all 47 species
Dcu_g01616 No alias polynucleotide kinase involved in ITS2 rRNA removal... 0.03 OrthoFinder output from all 47 species
Sam_g27409 No alias polynucleotide kinase involved in ITS2 rRNA removal... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140223 general transcription initiation factor activity IEP HCCA
InterPro domains Description Start Stop
IPR032319 CLP1_P 158 313
No external refs found!