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  5. Als_g20539

Als_g20539 (SSI1, ATSS1, SSI)


Aliases : SSI1, ATSS1, SSI

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0001429 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g20539

Target Alias Description ECC score Gene Family Method Actions
AT3G01180 SS2, AtSS2 starch synthase 2 0.04 OrthoFinder output from all 47 species
Aev_g04105 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.08 OrthoFinder output from all 47 species
Als_g29243 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08363 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69405 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene00061.t1 SS2, AtSS2,... EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene49350.t1 SSI1, ATSS1,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000433 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: CDS=512-2494 0.06 OrthoFinder output from all 47 species
Azfi_s0064.g035706 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: CDS=272-2404 0.03 OrthoFinder output from all 47 species
Cba_g04027 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29973 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g53636 SSI1, ATSS1, SSI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G059800.1 SS2, AtSS2,... not classified & original description: pacid=50634171... 0.04 OrthoFinder output from all 47 species
Cre04.g215150 SSI1, ATSS1, SSI Enzyme classification.EC_2 transferases.EC_2.4... 0.02 OrthoFinder output from all 47 species
Cre12.g521700 SSI1, ATSS1, SSI Enzyme classification.EC_2 transferases.EC_2.4... 0.02 OrthoFinder output from all 47 species
Dac_g23804 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g04884 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04935 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os02g51070.1 SS2, AtSS2,... starch synthase (SSII) 0.06 OrthoFinder output from all 47 species
LOC_Os06g06560.1 SSI1, ATSS1,... starch synthase (SSI) 0.02 OrthoFinder output from all 47 species
Len_g11881 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01990 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38859 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06738 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07560 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07958 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36405 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06445 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31466 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000793 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: CDS=352-2862 0.04 OrthoFinder output from all 47 species
Sam_g50354 No alias EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023903_P001 SS2, AtSS2,... starch synthase (SSII) 0.02 OrthoFinder output from all 47 species
Zm00001e036436_P004 SSI1, ATSS1,... starch synthase (SSI) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 152 409
IPR001296 Glyco_trans_1 466 613
No external refs found!