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  5. Pnu_g12311

Pnu_g12311 (PSAN)


Aliases : PSAN

Description : component *(PsaN) of PS-I complex & original description: none


Gene families : OG0005735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005735_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12311
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00209p00025500 PSAN,... Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.09 OrthoFinder output from all 47 species
AT5G64040 PSAN photosystem I reaction center subunit PSI-N,... 0.02 OrthoFinder output from all 47 species
Aev_g40606 PSAN component *(PsaN) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g00841 PSAN component *(PsaN) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11826 No alias component *(PsaN) of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013900 PSAN component *(PsaN) of PS-I complex & original... 0.07 OrthoFinder output from all 47 species
Ceric.07G046800.1 PSAN, Ceric.07G046800 component *(PsaN) of PS-I complex & original... 0.09 OrthoFinder output from all 47 species
Cre02.g082500 PSAN Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.07 OrthoFinder output from all 47 species
Dac_g25774 PSAN component *(PsaN) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g00342 PSAN component *(PsaN) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g42420 PSAN component *(PsaN) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g00512 PSAN component *(PsaN) of PS-I complex & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g22516 PSAN component *(PsaN) of PS-I complex & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01026478001 PSAN Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.03 OrthoFinder output from all 47 species
Gb_30707 PSAN component PsaN of PS-I complex 0.09 OrthoFinder output from all 47 species
LOC_Os12g08770.1 PSAN, LOC_Os12g08770 component PsaN of PS-I complex 0.04 OrthoFinder output from all 47 species
Len_g13102 PSAN component *(PsaN) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18419 PSAN component *(PsaN) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
MA_348255g0010 PSAN component PsaN of PS-I complex 0.05 OrthoFinder output from all 47 species
Mp4g20410.1 PSAN component PsaN of PS-I complex 0.12 OrthoFinder output from all 47 species
Msp_g00213 PSAN component *(PsaN) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02832 PSAN component *(PsaN) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g07562 PSAN component *(PsaN) of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g07563 PSAN component *(PsaN) of PS-I complex & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g00809 PSAN component *(PsaN) of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g00987 PSAN component *(PsaN) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g20344 No alias component *(PsaN) of PS-I complex & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010569 PSAN component *(PsaN) of PS-I complex & original... 0.04 OrthoFinder output from all 47 species
Solyc08g013670.3.1 PSAN, Solyc08g013670 component PsaN of PS-I complex 0.08 OrthoFinder output from all 47 species
Spa_g51107 PSAN component *(PsaN) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10460 PSAN component *(PsaN) of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e018392_P001 PSAN, Zm00001e018392 component PsaN of PS-I complex 0.07 OrthoFinder output from all 47 species
Zm00001e039588_P001 PSAN, Zm00001e039588 component PsaN of PS-I complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR008796 PSAN 42 159
No external refs found!