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  5. Pnu_g12267

Pnu_g12267


Description : transcriptional co-regulator *(Pirin) & original description: none


Gene families : OG0002091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002091_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g12267
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00020p00186610 evm_27.TU.AmTr_v1... Pirin-like protein OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
AT3G59220 PRN, PRN1, ATPIRIN1 pirin 0.02 OrthoFinder output from all 47 species
Adi_g097979 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
Als_g43410 No alias transcriptional co-regulator *(Pirin) & original... 0.02 OrthoFinder output from all 47 species
Aop_g55113 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.65 No alias Pirin-like protein OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
Dac_g14581 No alias transcriptional co-regulator *(Pirin) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g04607 No alias transcriptional co-regulator *(Pirin) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01031671001 No alias Pirin-like protein OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
GSVIVT01038385001 PRN, PRN1, ATPIRIN1 Pirin-like protein OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
Msp_g39239 No alias transcriptional co-regulator *(Pirin) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g60862 No alias transcriptional co-regulator *(Pirin) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e025778_P001 Zm00001e025778 Pirin-like protein OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008778 Pirin_C_dom 267 372
IPR003829 Pirin_N_dom 120 214
No external refs found!