Als_g15330


Description : not classified & original description: none


Gene families : OG0000977 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000977_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15330

Target Alias Description ECC score Gene Family Method Actions
AT1G72410 No alias COP1-interacting protein-related 0.02 OrthoFinder output from all 47 species
Adi_g011891 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g24725 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g33983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g50853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08158 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g43208 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene10116.t1 Aspi01Gene10116 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35840.t3 Aspi01Gene35840 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0768.g086018 No alias not classified & original description: CDS=451-4710 0.03 OrthoFinder output from all 47 species
Cba_g28078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g62258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G089800.1 Ceric.14G089800 not classified & original description: pacid=50634875... 0.03 OrthoFinder output from all 47 species
Ceric.23G038500.1 Ceric.23G038500 not classified & original description: pacid=50611329... 0.04 OrthoFinder output from all 47 species
Dac_g12580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12604 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g23146 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g08327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g39834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06229 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_16927 No alias COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_39029 No alias COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g23798 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g28446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29958 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_37764g0030 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g13987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20244 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g07636 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g17915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21641 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g12627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g11338 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g16858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27141 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16282 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011616 No alias not classified & original description: CDS=975-5132 0.03 OrthoFinder output from all 47 species
Sam_g11319 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g32529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g52368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g02216 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g07113 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47198 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47576 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g50180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13179 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e035552_P002 Zm00001e035552 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!