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  5. Als_g14510

Als_g14510


Description : not classified & original description: none


Gene families : OG0004454 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g14510

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00121p00103870 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Ala_g13001 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene71775.t1 Aspi01Gene71775 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0021.g015637 No alias not classified & original description: CDS=1-2424 0.03 OrthoFinder output from all 47 species
Ceric.09G038600.1 Ceric.09G038600 not classified & original description: pacid=50586912... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000792.35 No alias DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Cre10.g420900 No alias DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Dcu_g13828 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os12g29660.1 LOC_Os12g29660 DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Lfl_g05640 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_956864g0010 No alias DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g27091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59335 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc04g081580.4.1 Solyc04g081580 DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Tin_g11999 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e010143_P002 Zm00001e010143 DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 256 426
IPR001650 Helicase_C 464 572
No external refs found!