1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g14333

Als_g14333


Description : not classified & original description: none


Gene families : OG0004400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004400_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g14333

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271990 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT4G30990 No alias ARM repeat superfamily protein 0.08 OrthoFinder output from all 47 species
Aev_g15020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.31G030600.1 Ceric.31G030600 not classified & original description: pacid=50574249... 0.04 OrthoFinder output from all 47 species
Cre10.g461000 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g13106 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01021009001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os01g40250.1 LOC_Os01g40250 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g13195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_131618g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp4g16100.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Smo444016 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc09g092240.3.1 Solyc09g092240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g27076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016650_P001 Zm00001e016650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR046523 UTP20_C 1843 2059
IPR011430 UTP20_N 962 1554
No external refs found!