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  5. Pnu_g11654

Pnu_g11654


Description : not classified & original description: none


Gene families : OG0006966 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006966_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g11654
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT5G27560 No alias Domain of unknown function (DUF1995) 0.04 OrthoFinder output from all 47 species
Ala_g08571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_35506 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g01065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g098990.4.1 Solyc01g098990 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g04618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR018962 DUF1995 104 321
No external refs found!