Aliases : RPL12-C
Description : component *(bL12c) of large plastid ribosomal-subunit proteome & original description: none
Gene families : OG0004015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004015_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Als_g10576 | |
Cluster | HCCA: Cluster_213 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00036p00109340 | RPL12-A, RPL12,... | Protein biosynthesis.organelle translation... | 0.09 | OrthoFinder output from all 47 species | |
AT3G27830 | RPL12-A, RPL12 | ribosomal protein L12-A | 0.07 | OrthoFinder output from all 47 species | |
AT3G27850 | RPL12-C | ribosomal protein L12-C | 0.07 | OrthoFinder output from all 47 species | |
Adi_g010756 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Adi_g079765 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Aev_g46439 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Ala_g28151 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Als_g18386 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g05079 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
Azfi_s0003.g007798 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Cba_g26147 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.11G086700.1 | RPL12-C, Ceric.11G086700 | component *(bL12c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.23G047100.1 | RPL12-A, RPL12,... | component *(bL12c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Cre13.g581650 | No alias | Protein biosynthesis.organelle translation... | 0.1 | OrthoFinder output from all 47 species | |
Dac_g04548 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
Dcu_g09157 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g15795 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.13 | OrthoFinder output from all 47 species | |
Dcu_g41604 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Dde_g20806 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01032454001 | RPL12-A, RPL12 | Protein biosynthesis.organelle translation... | 0.04 | OrthoFinder output from all 47 species | |
Gb_05150 | RPL12-C | component psRPL12 of large ribosomal subunit proteome | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os01g47330.1 | RPL12-C, LOC_Os01g47330 | component psRPL12 of large ribosomal subunit proteome | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os05g49320.1 | RPL12-C, LOC_Os05g49320 | component psRPL12 of large ribosomal subunit proteome | 0.09 | OrthoFinder output from all 47 species | |
Len_g10218 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
Mp5g15720.1 | RPL12-C | component psRPL12 of large ribosomal subunit proteome | 0.14 | OrthoFinder output from all 47 species | |
Msp_g09960 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
Msp_g10664 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g08072 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
Ore_g01687 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
Ore_g06697 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Pir_g06429 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Pp3c26_10990V3.1 | RPL12-A, RPL12,... | ribosomal protein L12-A | 0.02 | OrthoFinder output from all 47 species | |
Pp3c4_24130V3.1 | RPL12-A, RPL12,... | ribosomal protein L12-C | 0.06 | OrthoFinder output from all 47 species | |
Pp3c5_2700V3.1 | RPL12-C, Pp3c5_2700 | ribosomal protein L12-C | 0.05 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0097.g019415 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
Sam_g51250 | No alias | component *(bL12c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Solyc02g086730.3.1 | RPL12-C, Solyc02g086730 | component psRPL12 of large ribosomal subunit proteome | 0.1 | OrthoFinder output from all 47 species | |
Solyc02g086740.1.1 | RPL12-C, Solyc02g086740 | component psRPL12 of large ribosomal subunit proteome | 0.11 | OrthoFinder output from all 47 species | |
Spa_g08718 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.09 | OrthoFinder output from all 47 species | |
Spa_g56005 | RPL12-C | component *(bL12c) of large plastid ribosomal-subunit... | 0.06 | OrthoFinder output from all 47 species | |
Tin_g00273 | RPL12-A, RPL12 | component *(bL12c) of large plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e020247_P001 | RPL12-C, Zm00001e020247 | component psRPL12 of large ribosomal subunit proteome | 0.1 | OrthoFinder output from all 47 species | |
Zm00001e028001_P001 | RPL12-C, Zm00001e028001 | component psRPL12 of large ribosomal subunit proteome | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005261 | monoatomic cation channel activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006729 | tetrahydrobiopterin biosynthetic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009522 | photosystem I | IEP | HCCA |
CC | GO:0009523 | photosystem II | IEP | HCCA |
CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
BP | GO:0010109 | regulation of photosynthesis | IEP | HCCA |
BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
MF | GO:0010242 | oxygen evolving activity | IEP | HCCA |
MF | GO:0015252 | proton channel activity | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | HCCA |
BP | GO:0034311 | diol metabolic process | IEP | HCCA |
BP | GO:0034312 | diol biosynthetic process | IEP | HCCA |
CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | HCCA |
BP | GO:0042549 | photosystem II stabilization | IEP | HCCA |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | HCCA |
BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | HCCA |
CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | HCCA |
BP | GO:0046146 | tetrahydrobiopterin metabolic process | IEP | HCCA |
BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
BP | GO:0046173 | polyol biosynthetic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No external refs found! |