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Aliases : ZOU, RGE1
Description : bHLH-type transcription factor & original description: none
Gene families : OG0000321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000321_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Als_g10141 | |
| Cluster | HCCA: Cluster_6 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g009449 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g03657 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0194.g057168 | No alias | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s1563.g104340 | No alias | not classified & original description: CDS=203-454 | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g18506 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_05232 | No alias | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0003.g001893 | No alias | bHLH-type transcription factor & original description: CDS=1-1161 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0026.g009493 | No alias | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0034.g011220 | ZOU, RGE1 | bHLH-type transcription factor & original description: CDS=1-1275 | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g31095 | No alias | bHLH-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g47033 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g00797 | ZOU, RGE1 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30853 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 216 | 267 |
| No external refs found! |