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  5. Als_g09947

Als_g09947 (GC5)


Aliases : GC5

Description : Golgin-type membrane tethering protein *(GC5/TMF) & original description: none


Gene families : OG0003150 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003150_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g09947
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00089980 GC5,... Vesicle trafficking.target membrane tethering.Golgi... 0.02 OrthoFinder output from all 47 species
AT1G79830 GC5 golgin candidate 5 0.05 OrthoFinder output from all 47 species
Adi_g103700 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.02 OrthoFinder output from all 47 species
Aev_g29811 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.07 OrthoFinder output from all 47 species
Ala_g08575 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.04 OrthoFinder output from all 47 species
Aob_g16762 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.06 OrthoFinder output from all 47 species
Aop_g09136 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13725.t1 GC5, Aspi01Gene13725 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G030700.1 GC5, Ceric.20G030700 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.05 OrthoFinder output from all 47 species
Cre03.g187000 GC5 Golgin candidate 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre09.g400812 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g07167 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.03 OrthoFinder output from all 47 species
Dde_g23623 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01038690001 GC5 Vesicle trafficking.target membrane tethering.Golgi... 0.06 OrthoFinder output from all 47 species
LOC_Os05g48620.1 GC5, LOC_Os05g48620 golgin (GC5/TMF) 0.02 OrthoFinder output from all 47 species
Lfl_g19932 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.06 OrthoFinder output from all 47 species
Mp8g06100.1 GC5 golgin (GC5/TMF) 0.06 OrthoFinder output from all 47 species
Msp_g15520 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.05 OrthoFinder output from all 47 species
Ore_g05368 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001142 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.03 OrthoFinder output from all 47 species
Solyc06g066610.4.1 GC5, Solyc06g066610 golgin (GC5/TMF) 0.06 OrthoFinder output from all 47 species
Zm00001e026507_P001 GC5, Zm00001e026507 golgin (GC5/TMF) 0.05 OrthoFinder output from all 47 species
Zm00001e026510_P001 GC5, Zm00001e026510 Golgin candidate 5 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Zm00001e032402_P001 GC5, Zm00001e032402 golgin (GC5/TMF) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR022092 TMF_DNA-bd 392 459
IPR022091 TMF_TATA-bd 810 912
No external refs found!