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  5. Als_g08549

Als_g08549


Description : component *(FLX) of FRI-C transcription effector complex & original description: none


Gene families : OG0000394 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g08549
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Adi_g042499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0268.g061092 No alias not classified & original description: CDS=1-831 0.03 OrthoFinder output from all 47 species
Cba_g11013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021834001 No alias Protein FLX-like 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Len_g14995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30490 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_78148g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g36056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00322 No alias component *(FLX) of FRI-C transcription effector complex... 0.02 OrthoFinder output from all 47 species
Pir_g53641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g009290.4.1 Solyc05g009290 Protein FLX-like 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g16924 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51340 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020893_P001 Zm00001e020893 Protein FLX-like 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e024097_P001 Zm00001e024097 Protein FLX-like 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!