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  5. Als_g06334

Als_g06334 (ATRLI2, RLI2)


Aliases : ATRLI2, RLI2

Description : ribosome recycling factor *(RLI/ABCE) & original description: none


Gene families : OG0003870 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003870_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g06334

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00025940 ATRLI2, RLI2,... Protein biosynthesis.translation termination.ribosome... 0.02 OrthoFinder output from all 47 species
AT4G19210 ATRLI2, RLI2 RNAse l inhibitor protein 2 0.04 OrthoFinder output from all 47 species
Aspi01Gene03321.t1 ATRLI2, RLI2,... ribosome recycling factor *(RLI/ABCE) & original... 0.04 OrthoFinder output from all 47 species
Cba_g14661 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.03 OrthoFinder output from all 47 species
Cba_g23414 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.03 OrthoFinder output from all 47 species
Ceric.05G080200.1 ATRLI2, RLI2,... ribosome recycling factor *(RLI/ABCE) & original... 0.02 OrthoFinder output from all 47 species
Dac_g00919 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g09918 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.03 OrthoFinder output from all 47 species
Mp8g05210.1 ATRLI2, RLI2 ribosome recycling factor (RLI/ABCE) 0.02 OrthoFinder output from all 47 species
Ppi_g03845 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.03 OrthoFinder output from all 47 species
Spa_g17331 ATRLI2, RLI2 ribosome recycling factor *(RLI/ABCE) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e001568_P005 ATRLI2, RLI2,... ribosome recycling factor (RLI/ABCE) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006189 'de novo' IMP biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007209 RNaseL-inhib-like_metal-bd_dom 6 37
IPR017896 4Fe4S_Fe-S-bd 49 71
IPR003439 ABC_transporter-like_ATP-bd 371 496
IPR003439 ABC_transporter-like_ATP-bd 102 244
No external refs found!