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  5. Pnu_g09314

Pnu_g09314 (YKT61, ATGP1, ATYKT61)


Aliases : YKT61, ATGP1, ATYKT61

Description : R-type YKT6-group component of SNARE longin membrane fusion complex & original description: none


Gene families : OG0002670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g09314

Target Alias Description ECC score Gene Family Method Actions
Adi_g078062 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Cre17.g728150 YKT61, ATGP1, ATYKT61 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Pir_g08987 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Smo166326 YKT61, ATGP1, ATYKT61 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR042855 V_SNARE_CC 237 294
IPR010908 Longin_dom 146 211
No external refs found!