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  5. Pnu_g08237

Pnu_g08237 (ATDJC39, ARL2)


Aliases : ATDJC39, ARL2

Description : not classified & original description: none


Gene families : OG0000227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g08237
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00209650 evm_27.TU.AmTr_v1... Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00041p00168770 evm_27.TU.AmTr_v1... Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00041p00169040 evm_27.TU.AmTr_v1... Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00064p00089690 J20,... Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G17880 No alias Chaperone DnaJ-domain superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g01968 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09684 J20 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g21455 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07977 TPR16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g25607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61816.t1 Aspi01Gene61816 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61820.t1 Aspi01Gene61820 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015886 J20 not classified & original description: CDS=137-550 0.03 OrthoFinder output from all 47 species
Azfi_s0024.g020416 No alias not classified & original description: CDS=52-738 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037845 No alias not classified & original description: CDS=1-747 0.04 OrthoFinder output from all 47 species
Azfi_s0365.g066960 No alias not classified & original description: CDS=1-849 0.03 OrthoFinder output from all 47 species
Ceric.17G063000.1 ATDJC39, ARL2,... not classified & original description: pacid=50617965... 0.03 OrthoFinder output from all 47 species
Ceric.20G067600.1 Ceric.20G067600 not classified & original description: pacid=50566614... 0.03 OrthoFinder output from all 47 species
Dac_g20831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26222 J20 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04446 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13496 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_04901 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_09162 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g43490.1 LOC_Os08g43490 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g28728 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24260 J20 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427494g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_241669g0010 ERDJ3B, ATERDJ3B Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_276247g0010 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_281725g0010 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_3759749g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_954466g0010 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp4g17730.1 J20 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g06689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42656 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g31687 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003473 No alias not classified & original description: CDS=1-837 0.04 OrthoFinder output from all 47 species
Solyc09g092260.4.1 J20, Solyc09g092260 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g10254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g39332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001518_P001 J2, ATJ2, Zm00001e001518 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e024686_P001 Zm00001e024686 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025612_P001 J20, Zm00001e025612 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 80 144
No external refs found!