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  5. Pnu_g03879

Pnu_g03879


Description : clade G phosphatase *(DBP) & original description: none


Gene families : OG0000632 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000632_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g03879
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT1G48040 No alias Protein phosphatase 2C family protein 0.01 OrthoFinder output from all 47 species
Adi_g065482 AtDBP1, DBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07905 No alias clade G phosphatase *(DBP) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g11052 No alias clade G phosphatase *(DBP) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03868 No alias clade G phosphatase *(DBP) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28118 No alias clade G phosphatase *(DBP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015809 AtDBP1, DBP1 clade G phosphatase *(DBP) & original description: CDS=1-1002 0.03 OrthoFinder output from all 47 species
Smo85781 No alias Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
Solyc04g082600.3.1 Solyc04g082600 transcription factor (DBP). clade G phosphatase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0140223 general transcription initiation factor activity IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 123 366
No external refs found!