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Heatmap: Cluster_38 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
0.39 -1.05 0.75 -0.93
Pnu_g00553 (MEE66)
 0.78 -0.11 0.01 -1.55
0.43 -0.31 0.16 -0.46
0.82 -1.63 0.93 -7.43
0.15 -0.15 0.37 -0.51
0.2 -0.07 0.1 -0.27
0.67 -0.47 0.63 -2.93
0.15 -0.01 0.09 -0.27
Pnu_g02929 (HB-3)
 0.43 -0.62 0.68 -1.35
Pnu_g03154 (SPL8)
 0.26 -0.38 0.89 -2.48
0.48 -0.1 0.36 -1.35
0.39 -0.24 0.38 -0.87
0.18 -0.15 0.23 -0.33
0.42 -1.15 1.14 -
Pnu_g05022 (SULTR1;1)
 0.99 -2.1 0.81 -5.2
0.99 -1.16 0.63 -5.76
Pnu_g05354 (GST8)
 0.49 -0.53 0.8 -2.57
0.59 -2.81 1.19 -3.73
0.41 -1.86 1.26 -
0.66 -0.29 0.65 -4.89
Pnu_g05825 (CLT2)
 0.16 -0.14 0.24 -0.33
Pnu_g05919 (emb1067)
 0.19 -0.23 0.18 -0.19
1.16 -0.89 0.29 -
1.19 -1.91 0.54 -
0.58 -0.32 0.66 -3.0
0.55 -0.37 0.56 -1.78
Pnu_g07283 (BGAL9)
 0.15 -0.11 0.08 -0.14
Pnu_g07623 (ENT3)
 0.23 -0.27 0.51 -0.8
0.61 -0.65 0.11 -0.4
0.53 -1.3 1.1 -
Pnu_g08013 (WRKY7)
 0.48 -0.26 0.03 -0.41
0.11 -0.21 0.14 -0.07
Pnu_g08231 (NPC1)
 0.34 -0.27 0.59 -1.32
0.38 -0.77 0.99 -2.95
0.1 -0.15 0.34 -0.39
Pnu_g08443 (mMDH1)
 0.57 -1.08 1.02 -6.77
Pnu_g08611 (FD1)
 0.09 -0.16 0.53 -0.74
0.35 -0.4 0.48 -0.81
0.27 -0.23 0.31 -0.5
Pnu_g08910 (OMT1)
 0.29 -0.87 0.83 -1.13
0.08 -0.1 0.2 -0.21
0.07 -0.07 0.13 -0.15
Pnu_g09137 (IPK1)
 0.19 -0.15 0.23 -0.34
0.06 -0.04 0.16 -0.2
Pnu_g09432 (PDF2)
 0.31 -0.31 0.49 -0.86
0.25 -0.14 0.21 -0.42
0.06 -0.2 0.2 -0.09
0.62 -2.97 1.04 -1.81
0.74 -0.55 0.71 -6.32
0.16 -0.07 0.19 -0.35
Pnu_g10914 (GGPS1)
 0.14 -0.2 0.21 -0.2
0.21 -0.3 0.19 -0.17
0.65 -0.75 0.78 -2.99
0.01 -0.14 0.21 -0.1
0.33 -0.32 0.25 -0.41
0.23 -0.26 0.25 -0.31
0.02 -0.15 0.24 -0.14
Pnu_g12835 (DNMT2)
 0.09 -0.18 0.16 -0.09
Pnu_g13305 (LDL3)
 0.11 -0.01 0.15 -0.28
0.27 -0.43 0.51 -0.67
Pnu_g13569 (ATB2)
 0.21 -0.37 0.25 -0.18
Pnu_g13871 (UGT85A2)
 0.4 -0.06 0.58 -2.21
1.14 -0.86 0.3 -5.97
0.36 -0.3 0.23 -0.45
Pnu_g14378 (RIN1)
 0.1 -0.12 0.34 -0.44
0.38 -0.33 0.37 -0.7
0.43 -0.3 0.23 -0.58
0.18 -0.08 0.31 -0.57
0.21 -0.13 0.41 -0.74
0.25 -0.08 0.18 -0.44
0.5 -0.34 0.42 -1.1
0.9 -1.47 0.16 -0.61
0.17 -0.18 0.4 -0.57
Pnu_g20123 (PAP18)
 0.2 -0.13 0.35 -0.6
0.19 -0.17 0.4 -0.61
0.87 -2.84 1.02 -
1.32 -2.61 0.42 -
0.15 -0.1 0.12 -0.2
1.01 -3.85 0.94 -
0.6 -0.73 0.81 -2.99
0.67 -2.0 0.9 -1.77
0.03 -0.25 0.37 -0.25
1.28 -1.04 0.11 -
0.86 -1.64 0.89 -7.9
0.48 -1.77 1.21 -
0.63 -2.52 1.19 -
Pnu_g22173 (FUS1)
 0.05 -0.03 0.25 -0.33
Pnu_g22359 (ATB2)
 0.73 -2.3 1.1 -
0.71 -4.16 1.17 -4.04
0.92 -1.13 0.72 -7.47
0.64 -3.09 1.22 -
0.66 -1.62 1.07 -
0.7 -2.26 1.11 -7.78
0.93 -0.66 0.55 -
0.38 -0.68 0.31 -0.26
0.15 -0.16 0.22 -0.26
0.75 -1.91 1.02 -5.79
0.22 -0.2 0.2 -0.29
0.34 -1.97 1.3 -5.48
Pnu_g25026 (CLI1)
 0.18 -0.56 0.58 -0.52
1.17 -1.26 0.37 -5.09
0.69 -1.88 0.8 -1.46
0.94 -1.34 0.75 -
0.41 -2.01 1.26 -5.26
0.97 -1.43 0.74 -8.47
Pnu_g25957 (UNE5)
 1.01 -2.62 0.87 -
0.7 - 1.25 -
-0.16 -1.11 1.06 -0.86
0.11 -0.12 0.23 -0.26
0.28 -1.44 1.09 -1.78
0.09 -0.15 0.44 -0.55
1.2 -1.87 0.52 -
0.88 -1.03 0.73 -
Pnu_g26749 (RPT3)
 0.05 -0.06 0.15 -0.16
0.8 -1.74 0.97 -
0.8 -0.93 0.8 -
Pnu_g26865 (AST12)
 1.33 -3.54 0.43 -4.17
0.85 -2.17 0.98 -
0.77 -1.38 0.94 -
0.93 -2.24 0.91 -
0.38 -0.18 0.32 -0.82
0.25 -0.16 0.04 -0.16
0.16 -0.14 0.13 -0.18
1.13 -1.56 0.55 -
1.14 -1.44 0.42 -3.38
1.14 -1.93 0.61 -
0.21 -0.47 0.45 -0.41
0.48 -1.69 1.2 -
1.4 -1.9 0.13 -
0.78 -1.71 0.97 -5.76
1.39 -1.28 -0.16 -3.88
1.15 -0.49 0.06 -5.07
0.16 -1.24 1.3 -
0.94 -0.63 0.48 -4.63
0.38 -1.19 1.17 -
0.75 -1.27 0.68 -1.72
0.43 -0.31 0.2 -0.53
Pnu_g30640 (CRR22)
 0.01 -0.14 0.23 -0.13
0.26 0.04 0.42 -1.18
0.94 -0.95 -0.21 -0.52
0.77 -1.11 0.87 -
0.72 -0.97 0.87 -5.55
0.86 -0.79 0.64 -4.34
0.96 -1.75 0.41 -1.23
1.05 -0.89 0.39 -3.58
0.34 -2.76 1.35 -4.97
0.74 -0.68 0.65 -2.89
0.89 -1.52 0.84 -
0.83 -0.98 0.75 -4.95
0.43 -2.68 1.32 -
Pnu_g33304 (ABF4)
 0.13 -0.08 0.34 -0.52
1.39 -1.65 0.09 -
0.96 -1.71 0.8 -7.16
Pnu_g33561 (PDI5)
 0.63 -3.25 1.22 -7.67
0.85 -0.89 0.67 -4.01
0.62 -2.95 1.23 -
0.62 -1.43 1.0 -3.41
0.01 -0.16 0.19 -0.06
Pnu_g34092 (GSTU20)
 0.57 -0.74 0.42 -0.78

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.