- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LUX, PCL1
Description : component *(LUX) of circadian clock Evening complex (EC) & original description: none
Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00101p00128190 | evm_27.TU.AmTr_v1... | Transcription factor LUX OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12147 | ARR11 | subgroup ARR-B transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g34149 | No alias | component *(LUX) of circadian clock Evening complex (EC)... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04420 | LUX, PCL1 | component *(LUX) of circadian clock Evening complex (EC)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g42522 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.16G029800.1 | ARR11, Ceric.16G029800 | subgroup ARR-B transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G035500.1 | RR12, ARR12,... | subgroup ARR-B transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G008400.1 | Ceric.31G008400 | subgroup ARR-B transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cre02.g083750 | LUX, PCL1 | Transcription factor BOA OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g47938 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g04897 | RR12, ARR12 | subgroup ARR-B transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g08460 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g06166 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g14477 | RR14, ARR14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g55320.1 | RR12, ARR12,... | B-type cytokinin ARR response activator. transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g28555 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_103946g0010 | RR2, ARR2 | B-type cytokinin ARR response activator. transcription... | 0.02 | OrthoFinder output from all 47 species | |
| MA_114951g0010 | ARR11 | B-type cytokinin ARR response activator. transcription... | 0.02 | OrthoFinder output from all 47 species | |
| MA_17547g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_601142g0010 | RR2, ARR2 | B-type cytokinin ARR response activator. transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g21220.1 | LUX, PCL1 | component LUX of circadian clock Evening complex (EC) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15114 | MYBC1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g25181 | ARR1, RR1 | subgroup ARR-B transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g20141 | RR12, ARR12 | subgroup ARR-B transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g39543 | No alias | subgroup ARR-B transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo444702 | ARR1, RR1 | RNA biosynthesis.transcriptional activation.ARR-B... | 0.04 | OrthoFinder output from all 47 species | |
| Smo90720 | ARR11 | RNA biosynthesis.transcriptional activation.ARR-B... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g18223 | ARR11 | subgroup ARR-B transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g21279 | RR12, ARR12 | subgroup ARR-B transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e016123_P001 | RR12, ARR12,... | B-type cytokinin ARR response activator. transcription... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 233 | 281 |
| No external refs found! |