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  5. Cba_g77943

Cba_g77943


Description : maturase *(MatK) & original description: none


Gene families : OG0009239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g77943
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
ATCG00040 MATK maturase K 0.15 OrthoFinder output from all 47 species
Aev_g12869 MATK maturase *(MatK) & original description: none 0.2 OrthoFinder output from all 47 species
Ala_g16220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G011900.1 Ceric.02G011900 not classified & original description: pacid=50586159... 0.14 OrthoFinder output from all 47 species
Ceric.1Z116700.1 Ceric.1Z116700 not classified & original description: pacid=50576996... 0.06 OrthoFinder output from all 47 species
Ceric.29G005800.1 Ceric.29G005800 not classified & original description: pacid=50625652... 0.14 OrthoFinder output from all 47 species
Dde_g25162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022885001 MATK RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Gb_01780 MATK maturase (MatK) 0.02 OrthoFinder output from all 47 species
LOC_Os04g16734.1 MATK, LOC_Os04g16734 maturase (MatK) 0.16 OrthoFinder output from all 47 species
Lfl_g12823 MATK maturase *(MatK) & original description: none 0.14 OrthoFinder output from all 47 species
Ore_g01567 MATK maturase *(MatK) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g14902 MATK not classified & original description: none 0.13 OrthoFinder output from all 47 species
Solyc00g500048.1.1 MATK, Solyc00g500048 maturase (MatK) 0.08 OrthoFinder output from all 47 species
Solyc00g500131.1.1 MATK, Solyc00g500131 maturase (MatK) 0.08 OrthoFinder output from all 47 species
Solyc00g500201.1.1 MATK, Solyc00g500201 maturase (MatK) 0.08 OrthoFinder output from all 47 species
Solyc00g500295.1.1 MATK, Solyc00g500295 maturase (MatK) 0.08 OrthoFinder output from all 47 species
Solyc00g500330.1.1 MATK, Solyc00g500330 maturase (MatK) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR024937 Domain_X 334 440
IPR024942 Maturase_MatK_N 3 304
No external refs found!