Description : component *(uS12) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0002074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002074_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00058p00204160 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
AT5G02960 | No alias | Ribosomal protein S12/S23 family protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g087932 | No alias | component *(uS12) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Als_g08953 | No alias | component *(uS12) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001264.27 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
Cre12.g504200 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01016341001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01025120001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
Gb_02361 | No alias | component RPS23 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Gb_36570 | No alias | component RPS23 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g61814.1 | LOC_Os01g61814 | component RPS23 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g60400.1 | LOC_Os03g60400 | component RPS23 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
MA_10436470g0020 | No alias | component RPS23 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
MA_19871g0020 | No alias | component RPS23 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
MA_9043057g0010 | No alias | component RPS23 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Mp2g08680.1 | No alias | component RPS23 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
Pp3c11_11070V3.1 | Pp3c11_11070 | Ribosomal protein S12/S23 family protein | 0.02 | OrthoFinder output from all 47 species | |
Sam_g23987 | No alias | component *(uS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g007350.3.1 | Solyc09g007350 | component RPS23 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
Solyc10g084310.2.1 | Solyc10g084310 | component RPS23 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g086020.3.1 | Solyc10g086020 | component RPS23 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Tin_g03594 | No alias | component *(uS12) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Tin_g26329 | No alias | component *(uS12) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019377_P001 | Zm00001e019377 | component RPS23 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e027265_P001 | Zm00001e027265 | component RPS23 of SSU proteome | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | HCCA |
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0007034 | vacuolar transport | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
CC | GO:0030117 | membrane coat | IEP | HCCA |
CC | GO:0030120 | vesicle coat | IEP | HCCA |
CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0042802 | identical protein binding | IEP | HCCA |
MF | GO:0042803 | protein homodimerization activity | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
MF | GO:0051087 | chaperone binding | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
MF | GO:0060590 | ATPase regulator activity | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006032 | Ribosomal_S12/S23 | 58 | 169 |
No external refs found! |