Coexpression cluster: Cluster_140 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034645 cellular macromolecule biosynthetic process 14.06% (9/64) 3.95 0.0 0.0
GO:0009059 macromolecule biosynthetic process 15.62% (10/64) 3.73 0.0 0.0
GO:0006518 peptide metabolic process 12.5% (8/64) 3.99 0.0 0.0
GO:0043603 amide metabolic process 12.5% (8/64) 3.96 0.0 0.0
GO:0043604 amide biosynthetic process 12.5% (8/64) 4.01 0.0 0.0
GO:0005198 structural molecule activity 12.5% (8/64) 3.92 0.0 1e-06
GO:0043043 peptide biosynthetic process 12.5% (8/64) 4.02 0.0 1e-06
GO:0003735 structural constituent of ribosome 12.5% (8/64) 4.04 0.0 1e-06
GO:0006412 translation 12.5% (8/64) 4.06 0.0 1e-06
GO:0044271 cellular nitrogen compound biosynthetic process 14.06% (9/64) 3.4 0.0 1e-06
GO:0044249 cellular biosynthetic process 15.62% (10/64) 3.02 0.0 3e-06
GO:0044260 cellular macromolecule metabolic process 14.06% (9/64) 3.19 1e-06 4e-06
GO:1901576 organic substance biosynthetic process 15.62% (10/64) 2.91 1e-06 5e-06
GO:1901566 organonitrogen compound biosynthetic process 12.5% (8/64) 3.36 1e-06 6e-06
GO:0009058 biosynthetic process 15.62% (10/64) 2.78 2e-06 1e-05
GO:0034641 cellular nitrogen compound metabolic process 14.06% (9/64) 2.52 2.6e-05 0.000127
GO:0043170 macromolecule metabolic process 18.75% (12/64) 1.55 0.000674 0.003134
GO:0019538 protein metabolic process 15.62% (10/64) 1.65 0.001216 0.005336
GO:0006807 nitrogen compound metabolic process 18.75% (12/64) 1.41 0.001527 0.006348
GO:1901564 organonitrogen compound metabolic process 15.62% (10/64) 1.39 0.004444 0.017555
GO:0004356 glutamate-ammonia ligase activity 1.56% (1/64) 7.02 0.007673 0.024248
GO:0030880 RNA polymerase complex 1.56% (1/64) 7.02 0.007673 0.024248
GO:0016880 acid-ammonia (or amide) ligase activity 1.56% (1/64) 7.02 0.007673 0.024248
GO:0016211 ammonia ligase activity 1.56% (1/64) 7.02 0.007673 0.024248
GO:0008152 metabolic process 20.31% (13/64) 1.07 0.007393 0.027813
GO:0071704 organic substance metabolic process 18.75% (12/64) 1.06 0.010786 0.031559
GO:0005840 ribosome 4.69% (3/64) 2.72 0.010711 0.032544
GO:0044237 cellular metabolic process 15.62% (10/64) 1.16 0.012776 0.036048
GO:0043228 non-membrane-bounded organelle 4.69% (3/64) 2.51 0.016008 0.040793
GO:0043232 intracellular non-membrane-bounded organelle 4.69% (3/64) 2.51 0.016008 0.040793
GO:0004177 aminopeptidase activity 1.56% (1/64) 6.02 0.015289 0.041649
GO:0006414 translational elongation 1.56% (1/64) 5.64 0.019831 0.047473
GO:0044238 primary metabolic process 17.19% (11/64) 1.0 0.019801 0.048884
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Angiopteris evecta HCCA Cluster_60 0.041 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_76 0.019 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_83 0.023 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_87 0.024 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_110 0.019 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_12 0.017 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_54 0.02 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_43 0.034 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_45 0.035 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_58 0.018 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_98 0.019 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_121 0.016 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_171 0.027 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_18 0.022 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_27 0.046 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_3 0.016 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_62 0.022 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_7 0.02 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_121 0.027 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_8 0.04 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_165 0.024 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_31 0.019 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_6 0.027 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_75 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_158 0.016 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_26 0.032 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_84 0.016 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_45 0.019 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_40 0.039 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_172 0.02 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_178 0.023 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_74 0.018 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_78 0.02 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_108 0.03 OrthoFinder output from all 47 species Compare
Sequences (64) (download table)

InterPro Domains

GO Terms

Family Terms