Coexpression cluster: Cluster_127 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006556 S-adenosylmethionine biosynthetic process 3.64% (2/55) 8.62 8e-06 0.0003
GO:0004478 methionine adenosyltransferase activity 3.64% (2/55) 8.62 8e-06 0.0003
GO:0046500 S-adenosylmethionine metabolic process 3.64% (2/55) 8.62 8e-06 0.0003
GO:0097159 organic cyclic compound binding 16.36% (9/55) 2.6 1.6e-05 0.000367
GO:1901363 heterocyclic compound binding 16.36% (9/55) 2.6 1.6e-05 0.000367
GO:0003674 molecular_function 25.45% (14/55) 1.84 2.2e-05 0.000446
GO:0030125 clathrin vesicle coat 3.64% (2/55) 7.62 4.2e-05 0.000544
GO:0030130 clathrin coat of trans-Golgi network vesicle 3.64% (2/55) 7.62 4.2e-05 0.000544
GO:0030132 clathrin coat of coated pit 3.64% (2/55) 7.62 4.2e-05 0.000544
GO:0030118 clathrin coat 3.64% (2/55) 7.62 4.2e-05 0.000544
GO:0098797 plasma membrane protein complex 3.64% (2/55) 7.4 5.9e-05 0.000597
GO:0044272 sulfur compound biosynthetic process 3.64% (2/55) 7.4 5.9e-05 0.000597
GO:0005488 binding 18.18% (10/55) 2.2 5.4e-05 0.000635
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 3.64% (2/55) 7.2 7.8e-05 0.000742
GO:0051649 establishment of localization in cell 5.45% (3/55) 5.12 9.1e-05 0.000756
GO:0046907 intracellular transport 5.45% (3/55) 5.12 9.1e-05 0.000756
GO:0003676 nucleic acid binding 12.73% (7/55) 3.35 5e-06 0.000757
GO:0051641 cellular localization 5.45% (3/55) 5.01 0.000113 0.000895
GO:0030120 vesicle coat 3.64% (2/55) 6.62 0.000184 0.001376
GO:0030117 membrane coat 3.64% (2/55) 6.3 0.000292 0.002072
GO:0006790 sulfur compound metabolic process 3.64% (2/55) 6.04 0.000424 0.002866
GO:0016192 vesicle-mediated transport 3.64% (2/55) 5.56 0.000825 0.005324
GO:0006886 intracellular protein transport 3.64% (2/55) 5.0 0.001807 0.011159
GO:0015031 protein transport 3.64% (2/55) 4.85 0.002216 0.011237
GO:0008104 protein localization 3.64% (2/55) 4.85 0.002216 0.011237
GO:0070727 cellular macromolecule localization 3.64% (2/55) 4.85 0.002216 0.011237
GO:0033036 macromolecule localization 3.64% (2/55) 4.85 0.002216 0.011237
GO:0045184 establishment of protein localization 3.64% (2/55) 4.85 0.002216 0.011237
GO:0010498 proteasomal protein catabolic process 1.82% (1/55) 8.2 0.003386 0.012329
GO:0030163 protein catabolic process 1.82% (1/55) 8.2 0.003386 0.012329
GO:0006289 nucleotide-excision repair 1.82% (1/55) 8.2 0.003386 0.012329
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process 1.82% (1/55) 8.2 0.003386 0.012329
GO:0071702 organic substance transport 3.64% (2/55) 4.59 0.00315 0.012781
GO:0051179 localization 5.45% (3/55) 3.37 0.003083 0.012876
GO:0008150 biological_process 14.55% (8/55) 1.7 0.003009 0.01295
GO:0006810 transport 5.45% (3/55) 3.41 0.002884 0.013211
GO:0051234 establishment of localization 5.45% (3/55) 3.41 0.002884 0.013211
GO:0009987 cellular process 12.73% (7/55) 1.86 0.003005 0.013333
GO:0071705 nitrogen compound transport 3.64% (2/55) 4.68 0.002782 0.013621
GO:0003924 GTPase activity 3.64% (2/55) 4.32 0.004534 0.016096
GO:0003684 damaged DNA binding 1.82% (1/55) 7.62 0.005075 0.017577
GO:0005525 GTP binding 3.64% (2/55) 4.02 0.00686 0.022653
GO:0032561 guanyl ribonucleotide binding 3.64% (2/55) 4.02 0.00686 0.022653
GO:0019001 guanyl nucleotide binding 3.64% (2/55) 4.0 0.007043 0.022728
GO:0017111 ribonucleoside triphosphate phosphatase activity 3.64% (2/55) 3.8 0.009198 0.029026
GO:0098796 membrane protein complex 3.64% (2/55) 3.71 0.010264 0.030364
GO:0043565 sequence-specific DNA binding 1.82% (1/55) 6.62 0.010125 0.03059
GO:0007034 vacuolar transport 1.82% (1/55) 6.62 0.010125 0.03059
GO:0016817 hydrolase activity, acting on acid anhydrides 3.64% (2/55) 3.64 0.011381 0.031689
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 3.64% (2/55) 3.64 0.011381 0.031689
GO:0016462 pyrophosphatase activity 3.64% (2/55) 3.65 0.011154 0.032322
GO:1901565 organonitrogen compound catabolic process 1.82% (1/55) 5.88 0.016819 0.045928
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_36 0.016 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_59 0.025 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_16 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_46 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_51 0.016 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_84 0.022 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_89 0.021 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_113 0.023 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_110 0.015 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_185 0.02 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_165 0.015 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_185 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_125 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_145 0.018 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_47 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_33 0.025 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_94 0.024 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_110 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_148 0.019 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_51 0.015 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_133 0.02 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_39 0.015 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_47 0.02 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_59 0.029 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_101 0.024 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_26 0.026 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_75 0.022 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_142 0.023 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_27 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_85 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_143 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_393 0.018 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_72 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_7 0.023 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_54 0.018 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_33 0.016 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_3 0.023 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_77 0.024 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_96 0.023 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_87 0.015 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_200 0.019 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_206 0.024 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_154 0.022 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_175 0.016 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_101 0.021 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_46 0.022 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_73 0.021 OrthoFinder output from all 47 species Compare
Sequences (55) (download table)

InterPro Domains

GO Terms

Family Terms