Coexpression cluster: Cluster_83 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006259 DNA metabolic process 20.34% (12/59) 5.37 0.0 0.0
GO:0006270 DNA replication initiation 10.17% (6/59) 8.61 0.0 0.0
GO:0090304 nucleic acid metabolic process 22.03% (13/59) 3.98 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 22.03% (13/59) 3.62 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 22.03% (13/59) 3.49 0.0 0.0
GO:0046483 heterocycle metabolic process 22.03% (13/59) 3.5 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 22.03% (13/59) 3.45 0.0 0.0
GO:0005524 ATP binding 28.81% (17/59) 2.78 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 20.34% (12/59) 3.58 0.0 0.0
GO:0035639 purine ribonucleoside triphosphate binding 28.81% (17/59) 2.64 0.0 0.0
GO:1901265 nucleoside phosphate binding 32.2% (19/59) 2.37 0.0 0.0
GO:0000166 nucleotide binding 32.2% (19/59) 2.37 0.0 0.0
GO:0036094 small molecule binding 32.2% (19/59) 2.32 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 22.03% (13/59) 3.06 0.0 0.0
GO:0032559 adenyl ribonucleotide binding 28.81% (17/59) 2.44 0.0 0.0
GO:0030554 adenyl nucleotide binding 28.81% (17/59) 2.38 0.0 0.0
GO:0032555 purine ribonucleotide binding 28.81% (17/59) 2.33 0.0 0.0
GO:0032553 ribonucleotide binding 28.81% (17/59) 2.31 0.0 0.0
GO:0097367 carbohydrate derivative binding 28.81% (17/59) 2.31 0.0 0.0
GO:0017076 purine nucleotide binding 28.81% (17/59) 2.27 0.0 0.0
GO:0003677 DNA binding 18.64% (11/59) 3.08 0.0 1e-06
GO:0043168 anion binding 28.81% (17/59) 2.2 0.0 1e-06
GO:1901363 heterocyclic compound binding 35.59% (21/59) 1.62 1e-06 1.1e-05
GO:0097159 organic cyclic compound binding 35.59% (21/59) 1.62 1e-06 1.1e-05
GO:0030915 Smc5-Smc6 complex 3.39% (2/59) 9.48 2e-06 1.4e-05
GO:0106068 SUMO ligase complex 3.39% (2/59) 9.48 2e-06 1.4e-05
GO:0009987 cellular process 33.9% (20/59) 1.6 3e-06 2.3e-05
GO:0003676 nucleic acid binding 20.34% (12/59) 2.28 5e-06 3.6e-05
GO:0006260 DNA replication 5.08% (3/59) 6.16 1e-05 6.5e-05
GO:0005488 binding 44.07% (26/59) 1.21 1e-05 6.6e-05
GO:0032991 protein-containing complex 11.86% (7/59) 3.22 1e-05 6.7e-05
GO:0043167 ion binding 28.81% (17/59) 1.59 2.4e-05 0.000146
GO:0008017 microtubule binding 5.08% (3/59) 5.26 6.8e-05 0.000392
GO:0043170 macromolecule metabolic process 25.42% (15/59) 1.62 6.6e-05 0.000392
GO:0003887 DNA-directed DNA polymerase activity 3.39% (2/59) 7.16 8.6e-05 0.000479
GO:0015631 tubulin binding 5.08% (3/59) 5.07 0.000102 0.000552
GO:0022402 cell cycle process 3.39% (2/59) 6.9 0.000126 0.000645
GO:0034061 DNA polymerase activity 3.39% (2/59) 6.9 0.000126 0.000645
GO:0006807 nitrogen compound metabolic process 25.42% (15/59) 1.51 0.000155 0.000776
GO:0044237 cellular metabolic process 23.73% (14/59) 1.59 0.000159 0.000776
GO:0008092 cytoskeletal protein binding 5.08% (3/59) 4.51 0.000318 0.001513
GO:0008150 biological_process 37.29% (22/59) 1.03 0.000426 0.001977
GO:0006281 DNA repair 5.08% (3/59) 4.06 0.000801 0.003633
GO:0051716 cellular response to stimulus 5.08% (3/59) 4.0 0.000894 0.003791
GO:0006974 cellular response to DNA damage stimulus 5.08% (3/59) 4.0 0.000894 0.003791
GO:0033554 cellular response to stress 5.08% (3/59) 4.0 0.000894 0.003791
GO:0044238 primary metabolic process 25.42% (15/59) 1.27 0.000948 0.003932
GO:0051097 negative regulation of helicase activity 1.69% (1/59) 9.48 0.001398 0.004545
GO:1905774 regulation of DNA helicase activity 1.69% (1/59) 9.48 0.001398 0.004545
GO:0007076 mitotic chromosome condensation 1.69% (1/59) 9.48 0.001398 0.004545
GO:0000796 condensin complex 1.69% (1/59) 9.48 0.001398 0.004545
GO:1905775 negative regulation of DNA helicase activity 1.69% (1/59) 9.48 0.001398 0.004545
GO:0030261 chromosome condensation 1.69% (1/59) 9.48 0.001398 0.004545
GO:0042555 MCM complex 1.69% (1/59) 9.48 0.001398 0.004545
GO:0043462 regulation of ATP-dependent activity 1.69% (1/59) 9.48 0.001398 0.004545
GO:0051095 regulation of helicase activity 1.69% (1/59) 9.48 0.001398 0.004545
GO:0032780 negative regulation of ATP-dependent activity 1.69% (1/59) 9.48 0.001398 0.004545
GO:1905463 negative regulation of DNA duplex unwinding 1.69% (1/59) 9.48 0.001398 0.004545
GO:1905462 regulation of DNA duplex unwinding 1.69% (1/59) 9.48 0.001398 0.004545
GO:0071704 organic substance metabolic process 25.42% (15/59) 1.22 0.001319 0.005358
GO:0007018 microtubule-based movement 3.39% (2/59) 4.93 0.001996 0.006277
GO:0003777 microtubule motor activity 3.39% (2/59) 4.93 0.001996 0.006277
GO:1990234 transferase complex 3.39% (2/59) 4.84 0.002256 0.006982
GO:0008152 metabolic process 25.42% (15/59) 1.13 0.00251 0.007649
GO:2001251 negative regulation of chromosome organization 1.69% (1/59) 8.48 0.002795 0.008135
GO:0051301 cell division 1.69% (1/59) 8.48 0.002795 0.008135
GO:0006269 DNA replication, synthesis of RNA primer 1.69% (1/59) 8.48 0.002795 0.008135
GO:0007017 microtubule-based process 3.39% (2/59) 4.62 0.003022 0.008666
GO:0003774 cytoskeletal motor activity 3.39% (2/59) 4.55 0.003337 0.00943
GO:0099080 supramolecular complex 1.69% (1/59) 7.9 0.00419 0.011192
GO:0031262 Ndc80 complex 1.69% (1/59) 7.9 0.00419 0.011192
GO:0000776 kinetochore 1.69% (1/59) 7.9 0.00419 0.011192
GO:0007059 chromosome segregation 1.69% (1/59) 7.9 0.00419 0.011192
GO:0044092 negative regulation of molecular function 1.69% (1/59) 7.48 0.005582 0.013956
GO:0051129 negative regulation of cellular component organization 1.69% (1/59) 7.48 0.005582 0.013956
GO:0043086 negative regulation of catalytic activity 1.69% (1/59) 7.48 0.005582 0.013956
GO:0010639 negative regulation of organelle organization 1.69% (1/59) 7.48 0.005582 0.013956
GO:0003674 molecular_function 49.15% (29/59) 0.6 0.005298 0.013961
GO:1903047 mitotic cell cycle process 1.69% (1/59) 7.16 0.006973 0.016997
GO:0033044 regulation of chromosome organization 1.69% (1/59) 7.16 0.006973 0.016997
GO:0016779 nucleotidyltransferase activity 3.39% (2/59) 3.75 0.009747 0.023464
GO:0140097 catalytic activity, acting on DNA 3.39% (2/59) 3.69 0.010645 0.025314
GO:0005575 cellular_component 13.56% (8/59) 1.38 0.010963 0.025756
GO:0006950 response to stress 5.08% (3/59) 2.59 0.013669 0.031733
GO:0030983 mismatched DNA binding 1.69% (1/59) 6.02 0.015278 0.035049
GO:0033043 regulation of organelle organization 1.69% (1/59) 5.9 0.016655 0.037331
GO:0006298 mismatch repair 1.69% (1/59) 5.9 0.016655 0.037331
GO:1902494 catalytic complex 3.39% (2/59) 3.25 0.01882 0.041704
GO:0004518 nuclease activity 3.39% (2/59) 3.21 0.020011 0.043845
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_139 0.02 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_278 0.022 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_69 0.022 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_2 0.046 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_5 0.018 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_16 0.017 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_19 0.023 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_54 0.057 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_78 0.02 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_35 0.022 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_137 0.024 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_11 0.044 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_50 0.101 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_208 0.036 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_252 0.033 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_18 0.097 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_46 0.017 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_49 0.021 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_50 0.065 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_275 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_300 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_21 0.035 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_26 0.042 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_37 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_52 0.018 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_63 0.021 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_79 0.017 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_138 0.025 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_142 0.029 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_147 0.106 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_182 0.016 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_34 0.027 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_38 0.057 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_93 0.019 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_97 0.031 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_100 0.131 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_117 0.021 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_134 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_30 0.033 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_287 0.02 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_296 0.022 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_19 0.098 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_24 0.017 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_59 0.028 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_91 0.021 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_18 0.103 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_59 0.018 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_80 0.021 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_12 0.018 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_36 0.018 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_53 0.118 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_81 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_130 0.038 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_18 0.054 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_83 0.017 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_109 0.026 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_139 0.082 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_32 0.056 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_28 0.017 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_44 0.015 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_62 0.029 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_73 0.032 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_11 0.084 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_51 0.063 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_57 0.023 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_61 0.018 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_141 0.101 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_7 0.074 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_10 0.016 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_121 0.017 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_154 0.052 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_5 0.018 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_7 0.016 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_66 0.056 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_99 0.018 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_125 0.021 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_2 0.018 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_109 0.102 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_117 0.021 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_20 0.153 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_34 0.02 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_17 0.09 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_143 0.061 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_157 0.026 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_11 0.017 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_78 0.045 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_100 0.018 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_101 0.017 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_102 0.02 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_13 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_27 0.034 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_99 0.019 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_170 0.021 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_288 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_303 0.017 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_22 0.033 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_79 0.101 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_85 0.019 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_193 0.024 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_197 0.016 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_228 0.017 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_232 0.061 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_39 0.017 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_3 0.018 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_25 0.031 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_39 0.032 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_145 0.019 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_234 0.02 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_11 0.094 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_155 0.015 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_168 0.027 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_19 0.07 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_20 0.019 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_21 0.097 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_22 0.061 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_53 0.015 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_129 0.025 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_130 0.02 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_31 0.039 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_34 0.059 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_44 0.019 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_64 0.015 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_87 0.016 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_9 0.047 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_14 0.029 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_17 0.021 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_146 0.078 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_190 0.016 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_16 0.021 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_37 0.145 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_76 0.019 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_14 0.017 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_39 0.034 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_65 0.068 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_85 0.16 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_86 0.015 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_96 0.019 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_15 0.151 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_21 0.019 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_27 0.023 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_92 0.017 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_121 0.029 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_167 0.032 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_17 0.031 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_31 0.025 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_77 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_85 0.132 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_97 0.023 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_120 0.041 OrthoFinder output from all 47 species Compare
Sequences (59) (download table)

InterPro Domains

GO Terms

Family Terms