ID | Label | % in cluster | Enrichment log2 | p-value | Corrected p-value |
---|---|---|---|---|---|
GO:0006259 | DNA metabolic process | 13.02% (25/192) | 4.43 | 0.0 | 0.0 |
GO:0006260 | DNA replication | 6.77% (13/192) | 5.84 | 0.0 | 0.0 |
GO:0044260 | cellular macromolecule metabolic process | 13.54% (26/192) | 3.19 | 0.0 | 0.0 |
GO:0090304 | nucleic acid metabolic process | 14.58% (28/192) | 3.03 | 0.0 | 0.0 |
GO:0046483 | heterocycle metabolic process | 15.62% (30/192) | 2.32 | 0.0 | 0.0 |
GO:0006725 | cellular aromatic compound metabolic process | 15.62% (30/192) | 2.33 | 0.0 | 0.0 |
GO:0006139 | nucleobase-containing compound metabolic process | 15.1% (29/192) | 2.39 | 0.0 | 0.0 |
GO:1901360 | organic cyclic compound metabolic process | 15.62% (30/192) | 2.29 | 0.0 | 0.0 |
GO:0003677 | DNA binding | 10.42% (20/192) | 2.76 | 0.0 | 0.0 |
GO:0034641 | cellular nitrogen compound metabolic process | 15.62% (30/192) | 2.04 | 0.0 | 0.0 |
GO:0003887 | DNA-directed DNA polymerase activity | 2.6% (5/192) | 5.85 | 0.0 | 0.0 |
GO:0006270 | DNA replication initiation | 2.6% (5/192) | 5.68 | 0.0 | 0.0 |
GO:0034061 | DNA polymerase activity | 2.6% (5/192) | 5.53 | 0.0 | 1e-06 |
GO:0140097 | catalytic activity, acting on DNA | 3.65% (7/192) | 4.09 | 0.0 | 2e-06 |
GO:0005524 | ATP binding | 14.06% (27/192) | 1.61 | 0.0 | 3e-06 |
GO:0032559 | adenyl ribonucleotide binding | 14.06% (27/192) | 1.61 | 0.0 | 3e-06 |
GO:0030554 | adenyl nucleotide binding | 14.06% (27/192) | 1.53 | 1e-06 | 8e-06 |
GO:0015631 | tubulin binding | 3.65% (7/192) | 3.78 | 1e-06 | 8e-06 |
GO:0003676 | nucleic acid binding | 11.46% (22/192) | 1.69 | 1e-06 | 1.4e-05 |
GO:0008092 | cytoskeletal protein binding | 3.65% (7/192) | 3.64 | 1e-06 | 1.5e-05 |
GO:1901265 | nucleoside phosphate binding | 15.1% (29/192) | 1.39 | 2e-06 | 1.7e-05 |
GO:0000166 | nucleotide binding | 15.1% (29/192) | 1.39 | 2e-06 | 1.7e-05 |
GO:0006281 | DNA repair | 3.65% (7/192) | 3.56 | 2e-06 | 1.8e-05 |
GO:0035639 | purine ribonucleoside triphosphate binding | 14.06% (27/192) | 1.43 | 3e-06 | 2.2e-05 |
GO:0032555 | purine ribonucleotide binding | 14.06% (27/192) | 1.43 | 3e-06 | 2.2e-05 |
GO:0032553 | ribonucleotide binding | 14.06% (27/192) | 1.41 | 3e-06 | 2.4e-05 |
GO:0051716 | cellular response to stimulus | 3.65% (7/192) | 3.45 | 3e-06 | 2.4e-05 |
GO:0033554 | cellular response to stress | 3.65% (7/192) | 3.45 | 3e-06 | 2.4e-05 |
GO:0006974 | cellular response to DNA damage stimulus | 3.65% (7/192) | 3.45 | 3e-06 | 2.4e-05 |
GO:0097367 | carbohydrate derivative binding | 14.06% (27/192) | 1.4 | 4e-06 | 2.5e-05 |
GO:0016779 | nucleotidyltransferase activity | 3.65% (7/192) | 3.43 | 4e-06 | 2.5e-05 |
GO:0000808 | origin recognition complex | 1.56% (3/192) | 6.11 | 5e-06 | 3.1e-05 |
GO:0036094 | small molecule binding | 15.1% (29/192) | 1.32 | 5e-06 | 3.2e-05 |
GO:0097159 | organic cyclic compound binding | 19.79% (38/192) | 1.08 | 7e-06 | 3.9e-05 |
GO:1901363 | heterocyclic compound binding | 19.79% (38/192) | 1.08 | 7e-06 | 3.9e-05 |
GO:0017076 | purine nucleotide binding | 14.06% (27/192) | 1.36 | 6e-06 | 3.9e-05 |
GO:0006950 | response to stress | 3.65% (7/192) | 3.15 | 1.4e-05 | 7.7e-05 |
GO:0043168 | anion binding | 14.06% (27/192) | 1.28 | 1.6e-05 | 8.7e-05 |
GO:0050896 | response to stimulus | 3.65% (7/192) | 3.05 | 2.2e-05 | 0.000113 |
GO:0140640 | catalytic activity, acting on a nucleic acid | 4.69% (9/192) | 2.38 | 6.2e-05 | 0.00032 |
GO:0051276 | chromosome organization | 2.08% (4/192) | 4.14 | 6.9e-05 | 0.000336 |
GO:0008017 | microtubule binding | 2.6% (5/192) | 3.53 | 6.8e-05 | 0.000341 |
GO:0043170 | macromolecule metabolic process | 15.62% (30/192) | 1.06 | 9.4e-05 | 0.000447 |
GO:0003777 | microtubule motor activity | 2.6% (5/192) | 3.43 | 9.7e-05 | 0.000453 |
GO:0003896 | DNA primase activity | 1.04% (2/192) | 6.53 | 0.000117 | 0.000478 |
GO:0006269 | DNA replication, synthesis of RNA primer | 1.04% (2/192) | 6.53 | 0.000117 | 0.000478 |
GO:0005664 | nuclear origin of replication recognition complex | 1.04% (2/192) | 6.53 | 0.000117 | 0.000478 |
GO:0007018 | microtubule-based movement | 2.6% (5/192) | 3.39 | 0.000109 | 0.000484 |
GO:0005634 | nucleus | 3.65% (7/192) | 2.69 | 0.000107 | 0.000486 |
GO:0009987 | cellular process | 21.35% (41/192) | 0.85 | 0.000115 | 0.0005 |
GO:0003774 | cytoskeletal motor activity | 2.6% (5/192) | 3.3 | 0.000149 | 0.000601 |
GO:0044237 | cellular metabolic process | 16.67% (32/192) | 0.98 | 0.000161 | 0.000634 |
GO:0007017 | microtubule-based process | 2.6% (5/192) | 3.18 | 0.000221 | 0.000855 |
GO:0140657 | ATP-dependent activity | 3.12% (6/192) | 2.66 | 0.000386 | 0.001465 |
GO:0043231 | intracellular membrane-bounded organelle | 3.65% (7/192) | 2.38 | 0.000404 | 0.001506 |
GO:0043227 | membrane-bounded organelle | 3.65% (7/192) | 2.37 | 0.000424 | 0.001552 |
GO:0043167 | ion binding | 15.1% (29/192) | 0.95 | 0.000455 | 0.001638 |
GO:0006807 | nitrogen compound metabolic process | 16.67% (32/192) | 0.87 | 0.000581 | 0.002054 |
GO:1903047 | mitotic cell cycle process | 1.04% (2/192) | 5.53 | 0.000689 | 0.002395 |
GO:0005488 | binding | 24.48% (47/192) | 0.66 | 0.000745 | 0.002505 |
GO:0006996 | organelle organization | 2.08% (4/192) | 3.28 | 0.000736 | 0.002514 |
GO:0043015 | gamma-tubulin binding | 1.04% (2/192) | 5.21 | 0.00114 | 0.003771 |
GO:0016043 | cellular component organization | 2.6% (5/192) | 2.36 | 0.002946 | 0.009587 |
GO:0022402 | cell cycle process | 1.04% (2/192) | 4.36 | 0.00399 | 0.012584 |
GO:0030983 | mismatched DNA binding | 1.04% (2/192) | 4.36 | 0.00399 | 0.012584 |
GO:0044238 | primary metabolic process | 16.15% (31/192) | 0.7 | 0.004813 | 0.014949 |
GO:0071840 | cellular component organization or biogenesis | 2.6% (5/192) | 2.18 | 0.005033 | 0.015174 |
GO:0071704 | organic substance metabolic process | 16.67% (32/192) | 0.68 | 0.004981 | 0.01524 |
GO:0006298 | mismatch repair | 1.04% (2/192) | 4.07 | 0.00601 | 0.017855 |
GO:0043229 | intracellular organelle | 4.17% (8/192) | 1.54 | 0.0067 | 0.019622 |
GO:0043226 | organelle | 4.17% (8/192) | 1.53 | 0.006854 | 0.019789 |
GO:0140513 | nuclear protein-containing complex | 1.56% (3/192) | 2.79 | 0.009188 | 0.026161 |
GO:0007076 | mitotic chromosome condensation | 0.52% (1/192) | 6.53 | 0.010822 | 0.028444 |
GO:0000796 | condensin complex | 0.52% (1/192) | 6.53 | 0.010822 | 0.028444 |
GO:0004146 | dihydrofolate reductase activity | 0.52% (1/192) | 6.53 | 0.010822 | 0.028444 |
GO:0046654 | tetrahydrofolate biosynthetic process | 0.52% (1/192) | 6.53 | 0.010822 | 0.028444 |
GO:0046653 | tetrahydrofolate metabolic process | 0.52% (1/192) | 6.53 | 0.010822 | 0.028444 |
GO:0032299 | ribonuclease H2 complex | 0.52% (1/192) | 6.53 | 0.010822 | 0.028444 |
GO:0003690 | double-stranded DNA binding | 1.04% (2/192) | 3.36 | 0.015908 | 0.041281 |
GO:0008152 | metabolic process | 16.67% (32/192) | 0.55 | 0.016844 | 0.043163 |
Clade | % in cluster | Enrichment log2 | p-value | Corrected p-value | Gene Family Method |
---|---|---|---|---|---|
No enriched Clades found |
Species | Clustering Method | Target | Jaccard index | Gene Family Method (for comparison) | Actions |
---|---|---|---|---|---|
Azolla filiculoides | HCCA | Cluster_2 | 0.019 | OrthoFinder output from all 47 species | Compare |
Azolla filiculoides | HCCA | Cluster_6 | 0.021 | OrthoFinder output from all 47 species | Compare |
Azolla filiculoides | HCCA | Cluster_7 | 0.016 | OrthoFinder output from all 47 species | Compare |
Azolla filiculoides | HCCA | Cluster_19 | 0.026 | OrthoFinder output from all 47 species | Compare |
Azolla filiculoides | HCCA | Cluster_54 | 0.038 | OrthoFinder output from all 47 species | Compare |
Azolla filiculoides | HCCA | Cluster_96 | 0.017 | OrthoFinder output from all 47 species | Compare |
Alsophila latebrosa | HCCA | Cluster_50 | 0.071 | OrthoFinder output from all 47 species | Compare |
Amblovenatum opulentum | HCCA | Cluster_18 | 0.082 | OrthoFinder output from all 47 species | Compare |
Amblovenatum opulentum | HCCA | Cluster_50 | 0.028 | OrthoFinder output from all 47 species | Compare |
Alsophila spinulosa | HCCA | Cluster_21 | 0.019 | OrthoFinder output from all 47 species | Compare |
Alsophila spinulosa | HCCA | Cluster_36 | 0.018 | OrthoFinder output from all 47 species | Compare |
Alsophila spinulosa | HCCA | Cluster_63 | 0.023 | OrthoFinder output from all 47 species | Compare |
Alsophila spinulosa | HCCA | Cluster_132 | 0.017 | OrthoFinder output from all 47 species | Compare |
Alsophila spinulosa | HCCA | Cluster_138 | 0.019 | OrthoFinder output from all 47 species | Compare |
Alsophila spinulosa | HCCA | Cluster_147 | 0.046 | OrthoFinder output from all 47 species | Compare |
Amborella trichopoda | HCCA | Cluster_34 | 0.026 | OrthoFinder output from all 47 species | Compare |
Amborella trichopoda | HCCA | Cluster_38 | 0.021 | OrthoFinder output from all 47 species | Compare |
Amborella trichopoda | HCCA | Cluster_97 | 0.024 | OrthoFinder output from all 47 species | Compare |
Amborella trichopoda | HCCA | Cluster_100 | 0.079 | OrthoFinder output from all 47 species | Compare |
Cyanophora paradoxa | HCCA | Cluster_19 | 0.1 | OrthoFinder output from all 47 species | Compare |
Cyanophora paradoxa | HCCA | Cluster_59 | 0.019 | OrthoFinder output from all 47 species | Compare |
Cyanophora paradoxa | HCCA | Cluster_91 | 0.018 | OrthoFinder output from all 47 species | Compare |
Chlamydomonas reinhardtii | HCCA | Cluster_17 | 0.016 | OrthoFinder output from all 47 species | Compare |
Chlamydomonas reinhardtii | HCCA | Cluster_59 | 0.017 | OrthoFinder output from all 47 species | Compare |
Chlamydomonas reinhardtii | HCCA | Cluster_83 | 0.016 | OrthoFinder output from all 47 species | Compare |
Ceratopteris richardii | HCCA | Cluster_53 | 0.066 | OrthoFinder output from all 47 species | Compare |
Ceratopteris richardii | HCCA | Cluster_81 | 0.017 | OrthoFinder output from all 47 species | Compare |
Ceratopteris richardii | HCCA | Cluster_130 | 0.022 | OrthoFinder output from all 47 species | Compare |
Diplazium proliferum (Lam.) Kaulf. | HCCA | Cluster_18 | 0.022 | OrthoFinder output from all 47 species | Compare |
Diplazium proliferum (Lam.) Kaulf. | HCCA | Cluster_139 | 0.038 | OrthoFinder output from all 47 species | Compare |
Dicranopteris curranii | HCCA | Cluster_32 | 0.03 | OrthoFinder output from all 47 species | Compare |
Gingko biloba | HCCA | Cluster_11 | 0.077 | OrthoFinder output from all 47 species | Compare |
Gingko biloba | HCCA | Cluster_51 | 0.021 | OrthoFinder output from all 47 species | Compare |
Gingko biloba | HCCA | Cluster_61 | 0.028 | OrthoFinder output from all 47 species | Compare |
Gingko biloba | HCCA | Cluster_141 | 0.047 | OrthoFinder output from all 47 species | Compare |
Lindsaea ensifolia | HCCA | Cluster_7 | 0.042 | OrthoFinder output from all 47 species | Compare |
Lindsaea ensifolia | HCCA | Cluster_154 | 0.032 | OrthoFinder output from all 47 species | Compare |
Lygodium flexuosum | HCCA | Cluster_66 | 0.037 | OrthoFinder output from all 47 species | Compare |
Microlepia speluncae | HCCA | Cluster_2 | 0.017 | OrthoFinder output from all 47 species | Compare |
Microlepia speluncae | HCCA | Cluster_109 | 0.043 | OrthoFinder output from all 47 species | Compare |
Marchantia polymorpha | HCCA | Cluster_20 | 0.154 | OrthoFinder output from all 47 species | Compare |
Marchantia polymorpha | HCCA | Cluster_34 | 0.046 | OrthoFinder output from all 47 species | Compare |
Nephrolepis biserrata | HCCA | Cluster_17 | 0.042 | OrthoFinder output from all 47 species | Compare |
Nephrolepis biserrata | HCCA | Cluster_143 | 0.045 | OrthoFinder output from all 47 species | Compare |
Oryza sativa | HCCA | Cluster_27 | 0.034 | OrthoFinder output from all 47 species | Compare |
Oryza sativa | HCCA | Cluster_80 | 0.018 | OrthoFinder output from all 47 species | Compare |
Oryza sativa | HCCA | Cluster_83 | 0.103 | OrthoFinder output from all 47 species | Compare |
Oryza sativa | HCCA | Cluster_170 | 0.022 | OrthoFinder output from all 47 species | Compare |
Picea abies | HCCA | Cluster_22 | 0.023 | OrthoFinder output from all 47 species | Compare |
Picea abies | HCCA | Cluster_79 | 0.09 | OrthoFinder output from all 47 species | Compare |
Picea abies | HCCA | Cluster_173 | 0.028 | OrthoFinder output from all 47 species | Compare |
Psilotum nudum | HCCA | Cluster_83 | 0.016 | OrthoFinder output from all 47 species | Compare |
Pyrrosia piloselloides | HCCA | Cluster_25 | 0.016 | OrthoFinder output from all 47 species | Compare |
Salvinia molesta | HCCA | Cluster_11 | 0.047 | OrthoFinder output from all 47 species | Compare |
Salvinia cucullata | HCCA | Cluster_19 | 0.051 | OrthoFinder output from all 47 species | Compare |
Salvinia cucullata | HCCA | Cluster_27 | 0.018 | OrthoFinder output from all 47 species | Compare |
Solanum lycopersicum | HCCA | Cluster_21 | 0.077 | OrthoFinder output from all 47 species | Compare |
Solanum lycopersicum | HCCA | Cluster_22 | 0.033 | OrthoFinder output from all 47 species | Compare |
Solanum lycopersicum | HCCA | Cluster_45 | 0.018 | OrthoFinder output from all 47 species | Compare |
Solanum lycopersicum | HCCA | Cluster_53 | 0.016 | OrthoFinder output from all 47 species | Compare |
Solanum lycopersicum | HCCA | Cluster_130 | 0.018 | OrthoFinder output from all 47 species | Compare |
Selaginella moellendorffii | HCCA | Cluster_31 | 0.028 | OrthoFinder output from all 47 species | Compare |
Selaginella moellendorffii | HCCA | Cluster_34 | 0.017 | OrthoFinder output from all 47 species | Compare |
Selaginella moellendorffii | HCCA | Cluster_87 | 0.024 | OrthoFinder output from all 47 species | Compare |
Stenochlaena palustris | HCCA | Cluster_9 | 0.051 | OrthoFinder output from all 47 species | Compare |
Stenochlaena palustris | HCCA | Cluster_138 | 0.021 | OrthoFinder output from all 47 species | Compare |
Stenochlaena palustris | HCCA | Cluster_146 | 0.037 | OrthoFinder output from all 47 species | Compare |
Tectaria incisa | HCCA | Cluster_37 | 0.105 | OrthoFinder output from all 47 species | Compare |
Vitis vinifera | HCCA | Cluster_85 | 0.115 | OrthoFinder output from all 47 species | Compare |
Vitis vinifera | HCCA | Cluster_109 | 0.023 | OrthoFinder output from all 47 species | Compare |
Zea mays | HCCA | Cluster_15 | 0.087 | OrthoFinder output from all 47 species | Compare |
Zea mays | HCCA | Cluster_121 | 0.022 | OrthoFinder output from all 47 species | Compare |
Arabidopsis thaliana | HCCA | Cluster_31 | 0.016 | OrthoFinder output from all 47 species | Compare |
Arabidopsis thaliana | HCCA | Cluster_85 | 0.097 | OrthoFinder output from all 47 species | Compare |
Arabidopsis thaliana | HCCA | Cluster_120 | 0.027 | OrthoFinder output from all 47 species | Compare |