Coexpression cluster: Cluster_10 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0090304 nucleic acid metabolic process 8.52% (15/176) 2.12 2e-06 0.000203
GO:0003677 DNA binding 7.39% (13/176) 2.41 1e-06 0.000213
GO:1901360 organic cyclic compound metabolic process 10.23% (18/176) 1.9 2e-06 0.000225
GO:0005488 binding 32.39% (57/176) 0.82 5e-06 0.000266
GO:0008270 zinc ion binding 5.11% (9/176) 2.77 7e-06 0.000278
GO:0006259 DNA metabolic process 4.55% (8/176) 3.02 7e-06 0.000279
GO:0006139 nucleobase-containing compound metabolic process 9.09% (16/176) 1.91 6e-06 0.00028
GO:0006725 cellular aromatic compound metabolic process 9.66% (17/176) 1.86 5e-06 0.000307
GO:0046483 heterocycle metabolic process 9.66% (17/176) 1.86 5e-06 0.000307
GO:0003674 molecular_function 49.43% (87/176) 0.63 1e-06 0.000378
GO:0003676 nucleic acid binding 11.36% (20/176) 1.59 1.1e-05 0.00038
GO:0006807 nitrogen compound metabolic process 16.48% (29/176) 1.14 4.4e-05 0.001365
GO:0016180 snRNA processing 1.14% (2/176) 6.79 8.2e-05 0.001894
GO:0034477 U6 snRNA 3'-end processing 1.14% (2/176) 6.79 8.2e-05 0.001894
GO:0016073 snRNA metabolic process 1.14% (2/176) 6.79 8.2e-05 0.001894
GO:0034472 snRNA 3'-end processing 1.14% (2/176) 6.79 8.2e-05 0.001894
GO:0008152 metabolic process 20.45% (36/176) 0.94 8.7e-05 0.001907
GO:0016788 hydrolase activity, acting on ester bonds 5.11% (9/176) 2.3 9.3e-05 0.001924
GO:0043167 ion binding 17.05% (30/176) 1.04 0.000111 0.002173
GO:0071704 organic substance metabolic process 18.75% (33/176) 0.95 0.000164 0.003041
GO:0006281 DNA repair 2.84% (5/176) 3.23 0.000195 0.003438
GO:0097159 organic cyclic compound binding 19.32% (34/176) 0.91 0.000218 0.003518
GO:1901363 heterocyclic compound binding 19.32% (34/176) 0.91 0.000218 0.003518
GO:0140513 nuclear protein-containing complex 2.84% (5/176) 3.11 0.000286 0.003534
GO:0006974 cellular response to DNA damage stimulus 2.84% (5/176) 3.11 0.000286 0.003534
GO:0051716 cellular response to stimulus 2.84% (5/176) 3.11 0.000286 0.003534
GO:0033554 cellular response to stress 2.84% (5/176) 3.11 0.000286 0.003534
GO:0044238 primary metabolic process 17.61% (31/176) 0.94 0.000313 0.003749
GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor 1.14% (2/176) 6.2 0.000244 0.003765
GO:0043170 macromolecule metabolic process 14.2% (25/176) 1.09 0.000265 0.003927
GO:0044237 cellular metabolic process 15.34% (27/176) 1.03 0.000285 0.00406
GO:0034641 cellular nitrogen compound metabolic process 9.09% (16/176) 1.39 0.000419 0.004857
GO:0006996 organelle organization 2.27% (4/176) 3.33 0.000667 0.007497
GO:0035639 purine ribonucleoside triphosphate binding 10.23% (18/176) 1.2 0.000871 0.009505
GO:0000413 protein peptidyl-prolyl isomerization 1.7% (3/176) 3.91 0.000993 0.010229
GO:0018208 peptidyl-proline modification 1.7% (3/176) 3.91 0.000993 0.010229
GO:0042578 phosphoric ester hydrolase activity 2.27% (4/176) 3.14 0.001085 0.010875
GO:0031123 RNA 3'-end processing 1.14% (2/176) 5.2 0.001196 0.011377
GO:0005524 ATP binding 9.09% (16/176) 1.25 0.001185 0.011566
GO:0004518 nuclease activity 2.27% (4/176) 3.09 0.001257 0.01166
GO:0008150 biological_process 26.7% (47/176) 0.61 0.001496 0.012908
GO:0036094 small molecule binding 11.36% (20/176) 1.06 0.00148 0.013071
GO:0032555 purine ribonucleotide binding 10.23% (18/176) 1.14 0.00145 0.013118
GO:0006310 DNA recombination 1.14% (2/176) 4.98 0.001664 0.013138
GO:0016667 oxidoreductase activity, acting on a sulfur group of donors 1.7% (3/176) 3.67 0.001632 0.013161
GO:0032553 ribonucleotide binding 10.23% (18/176) 1.12 0.001617 0.013335
GO:0046914 transition metal ion binding 5.68% (10/176) 1.63 0.001591 0.013418
GO:0000166 nucleotide binding 10.8% (19/176) 1.06 0.002032 0.014494
GO:1901265 nucleoside phosphate binding 10.8% (19/176) 1.06 0.002032 0.014494
GO:0032559 adenyl ribonucleotide binding 9.09% (16/176) 1.18 0.002025 0.015024
GO:0043168 anion binding 10.8% (19/176) 1.06 0.002009 0.015211
GO:0097367 carbohydrate derivative binding 10.23% (18/176) 1.1 0.00198 0.015301
GO:0140096 catalytic activity, acting on a protein 8.52% (15/176) 1.19 0.002472 0.017306
GO:0017076 purine nucleotide binding 10.23% (18/176) 1.05 0.002695 0.018177
GO:0003824 catalytic activity 25.57% (45/176) 0.58 0.002685 0.01845
GO:0008641 ubiquitin-like modifier activating enzyme activity 1.14% (2/176) 4.46 0.003503 0.022802
GO:0016877 ligase activity, forming carbon-sulfur bonds 1.14% (2/176) 4.46 0.003503 0.022802
GO:0030554 adenyl nucleotide binding 9.09% (16/176) 1.09 0.003771 0.024124
GO:0018193 peptidyl-amino acid modification 1.7% (3/176) 3.2 0.004194 0.026371
GO:0016859 cis-trans isomerase activity 1.7% (3/176) 3.09 0.005263 0.03149
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 1.7% (3/176) 3.09 0.005263 0.03149
GO:0043412 macromolecule modification 6.82% (12/176) 1.24 0.005203 0.032175
GO:0140097 catalytic activity, acting on DNA 1.7% (3/176) 3.05 0.005652 0.033283
GO:0009987 cellular process 18.18% (32/176) 0.66 0.006021 0.034367
GO:0016592 mediator complex 1.14% (2/176) 4.09 0.005965 0.034578
GO:0016043 cellular component organization 2.84% (5/176) 2.09 0.006652 0.036831
GO:0016787 hydrolase activity 9.09% (16/176) 1.0 0.006609 0.03715
GO:0008297 single-stranded DNA exodeoxyribonuclease activity 0.57% (1/176) 6.79 0.009062 0.040025
GO:0050080 malonyl-CoA decarboxylase activity 0.57% (1/176) 6.79 0.009062 0.040025
GO:0004529 exodeoxyribonuclease activity 0.57% (1/176) 6.79 0.009062 0.040025
GO:0042887 amide transmembrane transporter activity 0.57% (1/176) 6.79 0.009062 0.040025
GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 0.57% (1/176) 6.79 0.009062 0.040025
GO:0008409 5'-3' exonuclease activity 0.57% (1/176) 6.79 0.009062 0.040025
GO:0004536 deoxyribonuclease activity 0.57% (1/176) 6.79 0.009062 0.040025
GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters 0.57% (1/176) 6.79 0.009062 0.040025
GO:0030329 prenylcysteine metabolic process 0.57% (1/176) 6.79 0.009062 0.040025
GO:0030328 prenylcysteine catabolic process 0.57% (1/176) 6.79 0.009062 0.040025
GO:0071077 adenosine 3',5'-bisphosphate transmembrane transporter activity 0.57% (1/176) 6.79 0.009062 0.040025
GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity 0.57% (1/176) 6.79 0.009062 0.040025
GO:0008521 acetyl-CoA transmembrane transporter activity 0.57% (1/176) 6.79 0.009062 0.040025
GO:0035312 5'-3' exodeoxyribonuclease activity 0.57% (1/176) 6.79 0.009062 0.040025
GO:0019915 lipid storage 0.57% (1/176) 6.79 0.009062 0.040025
GO:0005634 nucleus 2.27% (4/176) 2.23 0.010563 0.046106
GO:0044260 cellular macromolecule metabolic process 5.11% (9/176) 1.36 0.008774 0.047871
GO:0008138 protein tyrosine/serine/threonine phosphatase activity 1.14% (2/176) 3.79 0.009015 0.04847
GO:0046872 metal ion binding 6.82% (12/176) 1.09 0.011464 0.049455
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_4 0.016 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_153 0.016 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_166 0.019 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_8 0.021 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_45 0.022 OrthoFinder output from all 47 species Compare
Adiantum latifolium HCCA Cluster_92 0.022 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_142 0.025 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_42 0.017 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_283 0.017 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_291 0.021 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_81 0.016 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_85 0.02 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_109 0.018 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_19 0.018 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_34 0.019 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_90 0.017 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_114 0.018 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_117 0.015 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_176 0.02 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_133 0.021 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_79 0.016 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_90 0.018 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_12 0.017 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_122 0.016 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_32 0.016 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_88 0.019 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_4 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_11 0.021 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_48 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_58 0.02 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_106 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_118 0.017 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_25 0.021 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_241 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_55 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_1 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_16 0.018 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_21 0.018 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_28 0.02 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_35 0.017 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_81 0.015 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_100 0.022 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_44 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_107 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_172 0.017 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_7 0.015 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_24 0.02 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_38 0.016 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_63 0.016 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_20 0.018 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_21 0.02 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_34 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_77 0.017 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_155 0.019 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_3 0.019 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_64 0.023 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_82 0.015 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_83 0.023 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_22 0.02 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_32 0.018 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_14 0.017 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_14 0.017 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_43 0.018 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_75 0.016 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_120 0.02 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_41 0.017 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_51 0.017 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_137 0.016 OrthoFinder output from all 47 species Compare
Sequences (176) (download table)

InterPro Domains

GO Terms

Family Terms