Coexpression cluster: Cluster_118 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0008152 metabolic process 26.22% (43/164) 1.88 0.0 0.0
GO:0071704 organic substance metabolic process 24.39% (40/164) 1.93 0.0 0.0
GO:0044238 primary metabolic process 23.78% (39/164) 1.97 0.0 0.0
GO:0009058 biosynthetic process 15.85% (26/164) 2.7 0.0 0.0
GO:0008150 biological_process 31.71% (52/164) 1.53 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 12.2% (20/164) 2.92 0.0 0.0
GO:1901576 organic substance biosynthetic process 14.02% (23/164) 2.63 0.0 0.0
GO:0003674 molecular_function 43.29% (71/164) 1.11 0.0 0.0
GO:0044249 cellular biosynthetic process 13.41% (22/164) 2.64 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 11.59% (19/164) 2.75 0.0 0.0
GO:0005840 ribosome 9.76% (16/164) 3.06 0.0 0.0
GO:0043228 non-membrane-bounded organelle 9.76% (16/164) 2.98 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 9.76% (16/164) 2.98 0.0 0.0
GO:0043604 amide biosynthetic process 9.76% (16/164) 2.99 0.0 0.0
GO:0043043 peptide biosynthetic process 9.76% (16/164) 3.0 0.0 0.0
GO:0003735 structural constituent of ribosome 9.76% (16/164) 3.0 0.0 0.0
GO:0006412 translation 9.76% (16/164) 3.01 0.0 0.0
GO:0043226 organelle 10.98% (18/164) 2.73 0.0 0.0
GO:0043229 intracellular organelle 10.98% (18/164) 2.73 0.0 0.0
GO:0006518 peptide metabolic process 9.76% (16/164) 2.94 0.0 0.0
GO:0005198 structural molecule activity 9.76% (16/164) 2.93 0.0 0.0
GO:0043603 amide metabolic process 9.76% (16/164) 2.92 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 17.07% (28/164) 1.98 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 9.76% (16/164) 2.91 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 12.8% (21/164) 2.35 0.0 0.0
GO:0005575 cellular_component 17.68% (29/164) 1.86 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 10.37% (17/164) 2.62 0.0 0.0
GO:0009059 macromolecule biosynthetic process 9.76% (16/164) 2.67 0.0 0.0
GO:0006807 nitrogen compound metabolic process 17.07% (28/164) 1.73 0.0 0.0
GO:0110165 cellular anatomical entity 14.63% (24/164) 1.88 0.0 0.0
GO:0009987 cellular process 20.73% (34/164) 1.46 0.0 1e-06
GO:0044237 cellular metabolic process 16.46% (27/164) 1.68 0.0 1e-06
GO:0003824 catalytic activity 21.95% (36/164) 1.29 0.0 5e-06
GO:0019538 protein metabolic process 12.8% (21/164) 1.84 0.0 5e-06
GO:0005975 carbohydrate metabolic process 6.1% (10/164) 2.95 1e-06 9e-06
GO:0044281 small molecule metabolic process 6.1% (10/164) 2.88 1e-06 1.3e-05
GO:0043170 macromolecule metabolic process 12.8% (21/164) 1.49 2e-05 0.000198
GO:0000166 nucleotide binding 9.76% (16/164) 1.56 0.000119 0.001066
GO:1901265 nucleoside phosphate binding 9.76% (16/164) 1.56 0.000119 0.001066
GO:0006082 organic acid metabolic process 3.66% (6/164) 2.99 0.000122 0.001067
GO:0019752 carboxylic acid metabolic process 3.66% (6/164) 3.0 0.000114 0.001074
GO:0043436 oxoacid metabolic process 3.66% (6/164) 3.0 0.000114 0.001074
GO:0051603 proteolysis involved in protein catabolic process 2.44% (4/164) 3.87 0.000173 0.001473
GO:0036094 small molecule binding 9.76% (16/164) 1.5 0.000192 0.0016
GO:0017076 purine nucleotide binding 9.15% (15/164) 1.54 0.000221 0.001801
GO:0032787 monocarboxylic acid metabolic process 2.44% (4/164) 3.74 0.000242 0.001924
GO:0005839 proteasome core complex 1.83% (3/164) 4.59 0.00027 0.002102
GO:0017111 ribonucleoside triphosphate phosphatase activity 3.66% (6/164) 2.52 0.000687 0.005237
GO:0035639 purine ribonucleoside triphosphate binding 7.93% (13/164) 1.5 0.000769 0.005742
GO:0016887 ATP hydrolysis activity 2.44% (4/164) 3.24 0.000901 0.006598
GO:0016817 hydrolase activity, acting on acid anhydrides 3.66% (6/164) 2.42 0.00098 0.006646
GO:0030554 adenyl nucleotide binding 7.32% (12/164) 1.53 0.001002 0.006668
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 3.66% (6/164) 2.43 0.000953 0.006707
GO:0016462 pyrophosphatase activity 3.66% (6/164) 2.43 0.000939 0.006741
GO:0043168 anion binding 8.54% (14/164) 1.39 0.00098 0.006764
GO:1901363 heterocyclic compound binding 13.41% (22/164) 1.02 0.001246 0.007729
GO:0097159 organic cyclic compound binding 13.41% (22/164) 1.02 0.001246 0.007729
GO:0032555 purine ribonucleotide binding 7.93% (13/164) 1.43 0.001203 0.007862
GO:0043167 ion binding 11.59% (19/164) 1.12 0.001228 0.007883
GO:0032553 ribonucleotide binding 7.93% (13/164) 1.41 0.001379 0.008413
GO:0097367 carbohydrate derivative binding 7.93% (13/164) 1.39 0.001559 0.009355
GO:0005488 binding 19.51% (32/164) 0.77 0.001795 0.010597
GO:0055086 nucleobase-containing small molecule metabolic process 2.44% (4/164) 2.92 0.002003 0.011636
GO:0140535 intracellular protein-containing complex 1.83% (3/164) 3.59 0.002049 0.011719
GO:0016853 isomerase activity 2.44% (4/164) 2.9 0.002135 0.012021
GO:0016874 ligase activity 1.83% (3/164) 3.37 0.003142 0.016914
GO:0004317 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity 0.61% (1/164) 8.33 0.003117 0.017029
GO:0019171 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity 0.61% (1/164) 8.33 0.003117 0.017029
GO:1902494 catalytic complex 2.44% (4/164) 2.7 0.003539 0.018772
GO:0005524 ATP binding 6.1% (10/164) 1.47 0.003613 0.018891
GO:0032559 adenyl ribonucleotide binding 6.1% (10/164) 1.38 0.005567 0.028699
GO:0006874 cellular calcium ion homeostasis 0.61% (1/164) 7.33 0.006225 0.028839
GO:0055074 calcium ion homeostasis 0.61% (1/164) 7.33 0.006225 0.028839
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process 0.61% (1/164) 7.33 0.006225 0.028839
GO:0032469 endoplasmic reticulum calcium ion homeostasis 0.61% (1/164) 7.33 0.006225 0.028839
GO:0019856 pyrimidine nucleobase biosynthetic process 0.61% (1/164) 7.33 0.006225 0.028839
GO:0004590 orotidine-5'-phosphate decarboxylase activity 0.61% (1/164) 7.33 0.006225 0.028839
GO:0004329 formate-tetrahydrofolate ligase activity 0.61% (1/164) 7.33 0.006225 0.028839
GO:0006206 pyrimidine nucleobase metabolic process 0.61% (1/164) 7.33 0.006225 0.028839
GO:0016879 ligase activity, forming carbon-nitrogen bonds 1.22% (2/164) 4.08 0.006308 0.028857
GO:0006629 lipid metabolic process 2.44% (4/164) 2.39 0.007355 0.033235
GO:0140662 ATP-dependent protein folding chaperone 1.83% (3/164) 2.91 0.007637 0.034089
GO:0044183 protein folding chaperone 1.83% (3/164) 2.84 0.008654 0.038161
GO:0051920 peroxiredoxin activity 0.61% (1/164) 6.74 0.009323 0.038339
GO:0046112 nucleobase biosynthetic process 0.61% (1/164) 6.74 0.009323 0.038339
GO:0004506 squalene monooxygenase activity 0.61% (1/164) 6.74 0.009323 0.038339
GO:0009112 nucleobase metabolic process 0.61% (1/164) 6.74 0.009323 0.038339
GO:0009349 riboflavin synthase complex 0.61% (1/164) 6.74 0.009323 0.038339
GO:0009179 purine ribonucleoside diphosphate metabolic process 1.22% (2/164) 3.71 0.010318 0.038535
GO:0006096 glycolytic process 1.22% (2/164) 3.71 0.010318 0.038535
GO:0009132 nucleoside diphosphate metabolic process 1.22% (2/164) 3.71 0.010318 0.038535
GO:0046939 nucleotide phosphorylation 1.22% (2/164) 3.71 0.010318 0.038535
GO:0009135 purine nucleoside diphosphate metabolic process 1.22% (2/164) 3.71 0.010318 0.038535
GO:0009185 ribonucleoside diphosphate metabolic process 1.22% (2/164) 3.71 0.010318 0.038535
GO:0006757 ATP generation from ADP 1.22% (2/164) 3.71 0.010318 0.038535
GO:0006165 nucleoside diphosphate phosphorylation 1.22% (2/164) 3.71 0.010318 0.038535
GO:0046031 ADP metabolic process 1.22% (2/164) 3.71 0.010318 0.038535
GO:0003779 actin binding 1.22% (2/164) 3.68 0.010726 0.038869
GO:0006090 pyruvate metabolic process 1.22% (2/164) 3.68 0.010726 0.038869
GO:0006163 purine nucleotide metabolic process 1.83% (3/164) 2.72 0.010915 0.039166
GO:0044283 small molecule biosynthetic process 1.83% (3/164) 2.73 0.010715 0.039613
GO:0016787 hydrolase activity 6.1% (10/164) 1.27 0.009135 0.039802
GO:0072521 purine-containing compound metabolic process 1.83% (3/164) 2.7 0.011322 0.040232
GO:0016421 CoA carboxylase activity 0.61% (1/164) 6.33 0.012411 0.042061
GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives 0.61% (1/164) 6.33 0.012411 0.042061
GO:0016885 ligase activity, forming carbon-carbon bonds 0.61% (1/164) 6.33 0.012411 0.042061
GO:0003989 acetyl-CoA carboxylase activity 0.61% (1/164) 6.33 0.012411 0.042061
GO:0016491 oxidoreductase activity 4.88% (8/164) 1.39 0.012083 0.042524
GO:0009117 nucleotide metabolic process 1.83% (3/164) 2.6 0.013715 0.046053
GO:0006753 nucleoside phosphate metabolic process 1.83% (3/164) 2.58 0.014179 0.047177
GO:0016854 racemase and epimerase activity 0.61% (1/164) 6.0 0.01549 0.047245
GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity 0.61% (1/164) 6.0 0.01549 0.047245
GO:0016776 phosphotransferase activity, phosphate group as acceptor 0.61% (1/164) 6.0 0.01549 0.047245
GO:1901475 pyruvate transmembrane transport 0.61% (1/164) 6.0 0.01549 0.047245
GO:0015718 monocarboxylic acid transport 0.61% (1/164) 6.0 0.01549 0.047245
GO:0004017 adenylate kinase activity 0.61% (1/164) 6.0 0.01549 0.047245
GO:0006850 mitochondrial pyruvate transmembrane transport 0.61% (1/164) 6.0 0.01549 0.047245
GO:0006848 pyruvate transport 0.61% (1/164) 6.0 0.01549 0.047245
GO:0003937 IMP cyclohydrolase activity 0.61% (1/164) 6.0 0.01549 0.047245
GO:0050145 nucleoside monophosphate kinase activity 0.61% (1/164) 6.0 0.01549 0.047245
GO:0016052 carbohydrate catabolic process 1.22% (2/164) 3.35 0.016656 0.049967
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_27 0.026 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_42 0.017 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_72 0.033 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_77 0.029 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_172 0.019 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_124 0.028 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_67 0.024 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_75 0.026 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_267 0.034 OrthoFinder output from all 47 species Compare
Amborella trichopoda HCCA Cluster_67 0.024 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_89 0.083 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_102 0.023 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_110 0.02 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_140 0.02 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_29 0.023 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_89 0.029 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_139 0.023 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_70 0.022 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_82 0.023 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_85 0.019 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_84 0.023 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_92 0.027 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_102 0.032 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_31 0.02 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_129 0.015 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_81 0.043 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_171 0.018 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_71 0.023 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_161 0.021 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_105 0.022 OrthoFinder output from all 47 species Compare
Ophioglossum reticulatum HCCA Cluster_163 0.019 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_54 0.016 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_122 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_117 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_135 0.024 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_157 0.025 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_186 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_286 0.018 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_36 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_13 0.019 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_102 0.026 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_134 0.025 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_175 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_202 0.02 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_345 0.016 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_70 0.025 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_138 0.016 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_107 0.016 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_74 0.022 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_127 0.036 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_97 0.026 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_162 0.019 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_14 0.022 OrthoFinder output from all 47 species Compare
Sequences (164) (download table)

InterPro Domains

GO Terms

Family Terms