Coexpression cluster: Cluster_3 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006796 phosphate-containing compound metabolic process 35.29% (18/51) 2.96 0.0 0.0
GO:0006793 phosphorus metabolic process 35.29% (18/51) 2.96 0.0 0.0
GO:0009987 cellular process 47.06% (24/51) 1.99 0.0 0.0
GO:0007165 signal transduction 17.65% (9/51) 4.21 0.0 0.0
GO:0004672 protein kinase activity 25.49% (13/51) 2.99 0.0 0.0
GO:0006468 protein phosphorylation 25.49% (13/51) 2.99 0.0 0.0
GO:0016310 phosphorylation 25.49% (13/51) 2.93 0.0 0.0
GO:0016773 phosphotransferase activity, alcohol group as acceptor 25.49% (13/51) 2.91 0.0 0.0
GO:0016301 kinase activity 25.49% (13/51) 2.88 0.0 0.0
GO:0016772 transferase activity, transferring phosphorus-containing groups 25.49% (13/51) 2.69 0.0 1e-06
GO:0036211 protein modification process 25.49% (13/51) 2.64 0.0 1e-06
GO:0044237 cellular metabolic process 35.29% (18/51) 2.06 0.0 1e-06
GO:0065007 biological regulation 17.65% (9/51) 3.35 0.0 1e-06
GO:0050789 regulation of biological process 17.65% (9/51) 3.36 0.0 1e-06
GO:0050794 regulation of cellular process 17.65% (9/51) 3.39 0.0 1e-06
GO:0008150 biological_process 47.06% (24/51) 1.56 0.0 1e-06
GO:0043412 macromolecule modification 25.49% (13/51) 2.56 0.0 1e-06
GO:0006807 nitrogen compound metabolic process 35.29% (18/51) 1.95 0.0 1e-06
GO:0140096 catalytic activity, acting on a protein 25.49% (13/51) 2.37 1e-06 4e-06
GO:0044238 primary metabolic process 35.29% (18/51) 1.82 1e-06 4e-06
GO:0071704 organic substance metabolic process 35.29% (18/51) 1.76 2e-06 8e-06
GO:0035556 intracellular signal transduction 11.76% (6/51) 3.99 2e-06 8e-06
GO:0003824 catalytic activity 41.18% (21/51) 1.5 3e-06 1.3e-05
GO:0019538 protein metabolic process 25.49% (13/51) 2.18 3e-06 1.3e-05
GO:0016740 transferase activity 25.49% (13/51) 2.1 6e-06 2.2e-05
GO:0008152 metabolic process 35.29% (18/51) 1.64 6e-06 2.2e-05
GO:0009187 cyclic nucleotide metabolic process 9.8% (5/51) 3.94 1.8e-05 5.9e-05
GO:0009190 cyclic nucleotide biosynthetic process 9.8% (5/51) 3.94 1.8e-05 5.9e-05
GO:0016849 phosphorus-oxygen lyase activity 9.8% (5/51) 3.91 2e-05 6.4e-05
GO:1901564 organonitrogen compound metabolic process 25.49% (13/51) 1.93 2.2e-05 6.7e-05
GO:0009165 nucleotide biosynthetic process 9.8% (5/51) 3.65 4.8e-05 0.000139
GO:1901293 nucleoside phosphate biosynthetic process 9.8% (5/51) 3.65 4.8e-05 0.000139
GO:0043170 macromolecule metabolic process 25.49% (13/51) 1.77 7e-05 0.000196
GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity 5.88% (3/51) 5.12 8.6e-05 0.000233
GO:0003674 molecular_function 52.94% (27/51) 0.96 9.2e-05 0.000243
GO:0009117 nucleotide metabolic process 9.8% (5/51) 3.41 0.000106 0.000263
GO:0004112 cyclic-nucleotide phosphodiesterase activity 5.88% (3/51) 5.03 0.000105 0.000267
GO:0006753 nucleoside phosphate metabolic process 9.8% (5/51) 3.38 0.000115 0.000279
GO:0016829 lyase activity 9.8% (5/51) 3.37 0.000119 0.00028
GO:0090407 organophosphate biosynthetic process 9.8% (5/51) 3.36 0.000122 0.00028
GO:0055086 nucleobase-containing small molecule metabolic process 9.8% (5/51) 3.26 0.000168 0.000377
GO:0034654 nucleobase-containing compound biosynthetic process 9.8% (5/51) 3.16 0.000232 0.000508
GO:0008081 phosphoric diester hydrolase activity 5.88% (3/51) 4.57 0.000273 0.000584
GO:0019637 organophosphate metabolic process 9.8% (5/51) 3.1 0.000286 0.000598
GO:0032559 adenyl ribonucleotide binding 17.65% (9/51) 1.93 0.000488 0.000956
GO:0005524 ATP binding 17.65% (9/51) 1.94 0.000471 0.000963
GO:0019438 aromatic compound biosynthetic process 9.8% (5/51) 2.93 0.000487 0.000974
GO:0018130 heterocycle biosynthetic process 9.8% (5/51) 2.89 0.000559 0.001071
GO:1901362 organic cyclic compound biosynthetic process 9.8% (5/51) 2.82 0.000687 0.00129
GO:0030554 adenyl nucleotide binding 17.65% (9/51) 1.86 0.000712 0.001309
GO:0035639 purine ribonucleoside triphosphate binding 17.65% (9/51) 1.76 0.001154 0.002082
GO:0032555 purine ribonucleotide binding 17.65% (9/51) 1.75 0.00119 0.002105
GO:0032553 ribonucleotide binding 17.65% (9/51) 1.74 0.001292 0.002242
GO:0097367 carbohydrate derivative binding 17.65% (9/51) 1.73 0.00134 0.002284
GO:0042578 phosphoric ester hydrolase activity 5.88% (3/51) 3.71 0.001573 0.002632
GO:0017076 purine nucleotide binding 17.65% (9/51) 1.69 0.001642 0.002697
GO:0044281 small molecule metabolic process 9.8% (5/51) 2.49 0.001892 0.003054
GO:0043168 anion binding 17.65% (9/51) 1.61 0.00233 0.003573
GO:1901265 nucleoside phosphate binding 17.65% (9/51) 1.61 0.00233 0.003573
GO:0000166 nucleotide binding 17.65% (9/51) 1.61 0.00233 0.003573
GO:0036094 small molecule binding 17.65% (9/51) 1.54 0.003253 0.004906
GO:0044271 cellular nitrogen compound biosynthetic process 9.8% (5/51) 2.28 0.003571 0.0053
GO:0044249 cellular biosynthetic process 9.8% (5/51) 1.98 0.008602 0.012562
GO:1901576 organic substance biosynthetic process 9.8% (5/51) 1.89 0.011029 0.015854
GO:0016788 hydrolase activity, acting on ester bonds 5.88% (3/51) 2.59 0.013475 0.019072
GO:0006139 nucleobase-containing compound metabolic process 9.8% (5/51) 1.77 0.015375 0.021432
GO:0009058 biosynthetic process 9.8% (5/51) 1.76 0.015732 0.021603
GO:0043167 ion binding 17.65% (9/51) 1.18 0.016211 0.021932
GO:0005216 monoatomic ion channel activity 3.92% (2/51) 3.31 0.017276 0.023034
GO:0006725 cellular aromatic compound metabolic process 9.8% (5/51) 1.66 0.02075 0.027271
GO:0046483 heterocycle metabolic process 9.8% (5/51) 1.65 0.021186 0.027452
GO:0022803 passive transmembrane transporter activity 3.92% (2/51) 3.07 0.023775 0.029559
GO:0015267 channel activity 3.92% (2/51) 3.07 0.023775 0.029559
GO:1901360 organic cyclic compound metabolic process 9.8% (5/51) 1.61 0.023145 0.029575
GO:0000160 phosphorelay signal transduction system 1.96% (1/51) 4.74 0.036745 0.045074
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amblovenatum opulentum HCCA Cluster_488 0.018 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_21 0.016 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_77 0.026 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_87 0.016 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_9 0.024 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_19 0.047 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_32 0.045 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_44 0.039 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_47 0.02 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_51 0.019 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_64 0.023 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_77 0.09 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_79 0.028 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_56 0.016 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_251 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_132 0.015 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_273 0.019 OrthoFinder output from all 47 species Compare
Sequences (51) (download table)

InterPro Domains

GO Terms

Family Terms