Coexpression cluster: Cluster_21 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0065007 biological regulation 9.52% (10/105) 1.97 0.000239 0.008114
GO:0007165 signal transduction 8.57% (9/105) 2.42 5e-05 0.008578
GO:0055085 transmembrane transport 6.67% (7/105) 2.69 0.000114 0.00965
GO:0050789 regulation of biological process 9.52% (10/105) 1.98 0.000229 0.009744
GO:0050794 regulation of cellular process 9.52% (10/105) 2.03 0.000174 0.00988
GO:0051179 localization 7.62% (8/105) 2.08 0.000624 0.013252
GO:0051234 establishment of localization 7.62% (8/105) 2.1 0.000579 0.014066
GO:0006811 monoatomic ion transport 4.76% (5/105) 2.82 0.000745 0.014071
GO:0006810 transport 7.62% (8/105) 2.11 0.000562 0.015927
GO:0055086 nucleobase-containing small molecule metabolic process 4.76% (5/105) 2.62 0.001356 0.017731
GO:0016849 phosphorus-oxygen lyase activity 3.81% (4/105) 3.1 0.00126 0.017845
GO:0009187 cyclic nucleotide metabolic process 3.81% (4/105) 3.12 0.001177 0.018188
GO:0009190 cyclic nucleotide biosynthetic process 3.81% (4/105) 3.12 0.001177 0.018188
GO:0035556 intracellular signal transduction 4.76% (5/105) 2.48 0.002098 0.023772
GO:0034654 nucleobase-containing compound biosynthetic process 4.76% (5/105) 2.5 0.001971 0.023932
GO:0009165 nucleotide biosynthetic process 3.81% (4/105) 2.81 0.002592 0.025925
GO:1901293 nucleoside phosphate biosynthetic process 3.81% (4/105) 2.81 0.002592 0.025925
GO:0018130 heterocycle biosynthetic process 4.76% (5/105) 2.28 0.003845 0.034399
GO:0019438 aromatic compound biosynthetic process 4.76% (5/105) 2.28 0.003778 0.035682
GO:0015075 monoatomic ion transmembrane transporter activity 3.81% (4/105) 2.57 0.00467 0.036086
GO:1901362 organic cyclic compound biosynthetic process 4.76% (5/105) 2.21 0.004634 0.03751
GO:0016829 lyase activity 3.81% (4/105) 2.58 0.004566 0.038814
GO:0022857 transmembrane transporter activity 4.76% (5/105) 2.15 0.005532 0.040885
GO:0009117 nucleotide metabolic process 3.81% (4/105) 2.49 0.005793 0.041037
GO:0006753 nucleoside phosphate metabolic process 3.81% (4/105) 2.46 0.006163 0.041906
GO:0090407 organophosphate biosynthetic process 3.81% (4/105) 2.43 0.006679 0.042053
GO:0005215 transporter activity 4.76% (5/105) 2.09 0.006546 0.042802
GO:0005216 monoatomic ion channel activity 2.86% (3/105) 2.92 0.007342 0.044575
GO:0016020 membrane 4.76% (5/105) 1.97 0.009201 0.04888
GO:0022803 passive transmembrane transporter activity 2.86% (3/105) 2.82 0.008955 0.04911
GO:0015267 channel activity 2.86% (3/105) 2.82 0.008955 0.04911
GO:1990397 queuosine salvage 0.95% (1/105) 6.88 0.008483 0.04973
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amblovenatum opulentum HCCA Cluster_306 0.016 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_68 0.018 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_94 0.025 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_255 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_287 0.015 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_3 0.023 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_6 0.023 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_17 0.016 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_28 0.032 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_29 0.021 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_35 0.015 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_37 0.016 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_40 0.016 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_48 0.037 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_58 0.026 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_65 0.015 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_72 0.02 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_77 0.025 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_87 0.035 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_92 0.025 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_3 0.016 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_19 0.019 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_20 0.019 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_66 0.026 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_68 0.015 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_77 0.016 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_79 0.02 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_55 0.02 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_61 0.015 OrthoFinder output from all 47 species Compare
Diplazium proliferum (Lam.) Kaulf. HCCA Cluster_144 0.016 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_31 0.016 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_28 0.025 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_69 0.017 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_133 0.022 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_32 0.022 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_130 0.02 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_86 0.016 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_130 0.016 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_66 0.017 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_176 0.016 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_26 0.015 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_5 0.016 OrthoFinder output from all 47 species Compare
Arabidopsis thaliana HCCA Cluster_29 0.015 OrthoFinder output from all 47 species Compare
Sequences (105) (download table)

InterPro Domains

GO Terms

Family Terms