Coexpression cluster: Cluster_102 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 41.62% (82/197) 0.87 0.0 1e-06
GO:0005488 binding 26.9% (53/197) 1.04 0.0 2.8e-05
GO:0050789 regulation of biological process 6.6% (13/197) 2.25 4e-06 0.000287
GO:0043565 sequence-specific DNA binding 3.05% (6/197) 3.89 4e-06 0.0003
GO:0065007 biological regulation 6.6% (13/197) 2.22 6e-06 0.000302
GO:0050794 regulation of cellular process 6.6% (13/197) 2.3 3e-06 0.000343
GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity 1.02% (2/197) 7.92 2.3e-05 0.00043
GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor 1.02% (2/197) 7.92 2.3e-05 0.00043
GO:0051252 regulation of RNA metabolic process 5.08% (10/197) 2.49 1.4e-05 0.000465
GO:0031326 regulation of cellular biosynthetic process 5.08% (10/197) 2.42 2.2e-05 0.000467
GO:0010556 regulation of macromolecule biosynthetic process 5.08% (10/197) 2.42 2.2e-05 0.000467
GO:0009889 regulation of biosynthetic process 5.08% (10/197) 2.42 2.2e-05 0.000467
GO:0010468 regulation of gene expression 5.08% (10/197) 2.38 2.7e-05 0.000486
GO:1903506 regulation of nucleic acid-templated transcription 5.08% (10/197) 2.5 1.4e-05 0.00049
GO:2001141 regulation of RNA biosynthetic process 5.08% (10/197) 2.5 1.4e-05 0.00049
GO:0006355 regulation of DNA-templated transcription 5.08% (10/197) 2.5 1.4e-05 0.00049
GO:0019219 regulation of nucleobase-containing compound metabolic process 5.08% (10/197) 2.46 1.7e-05 0.000501
GO:0008150 biological_process 22.84% (45/197) 0.91 2.1e-05 0.000579
GO:0051171 regulation of nitrogen compound metabolic process 5.08% (10/197) 2.32 3.9e-05 0.000607
GO:0080090 regulation of primary metabolic process 5.08% (10/197) 2.32 3.9e-05 0.000607
GO:0031323 regulation of cellular metabolic process 5.08% (10/197) 2.32 3.9e-05 0.000656
GO:0019222 regulation of metabolic process 5.08% (10/197) 2.29 4.7e-05 0.000657
GO:0060255 regulation of macromolecule metabolic process 5.08% (10/197) 2.29 4.6e-05 0.000679
GO:1901363 heterocyclic compound binding 15.74% (31/197) 1.02 0.000136 0.00176
GO:0097159 organic cyclic compound binding 15.74% (31/197) 1.02 0.000136 0.00176
GO:0003824 catalytic activity 18.78% (37/197) 0.89 0.000162 0.002012
GO:0003676 nucleic acid binding 8.63% (17/197) 1.46 0.000177 0.002117
GO:0016725 oxidoreductase activity, acting on CH or CH2 groups 1.02% (2/197) 6.18 0.000335 0.003866
GO:0006796 phosphate-containing compound metabolic process 6.09% (12/197) 1.67 0.000453 0.004875
GO:0006793 phosphorus metabolic process 6.09% (12/197) 1.67 0.000453 0.004875
GO:0003700 DNA-binding transcription factor activity 3.05% (6/197) 2.51 0.000715 0.007451
GO:0006721 terpenoid metabolic process 1.02% (2/197) 5.6 0.000775 0.007584
GO:0016114 terpenoid biosynthetic process 1.02% (2/197) 5.6 0.000775 0.007584
GO:0000287 magnesium ion binding 1.52% (3/197) 3.98 0.000945 0.008973
GO:0140110 transcription regulator activity 3.05% (6/197) 2.42 0.000991 0.009146
GO:0043167 ion binding 12.18% (24/197) 0.96 0.001392 0.012492
GO:0003677 DNA binding 4.06% (8/197) 1.79 0.002442 0.021315
GO:0019825 oxygen binding 0.51% (1/197) 8.5 0.002756 0.023424
GO:0008299 isoprenoid biosynthetic process 1.02% (2/197) 4.5 0.003549 0.028659
GO:0006720 isoprenoid metabolic process 1.02% (2/197) 4.5 0.003549 0.028659
GO:0006753 nucleoside phosphate metabolic process 2.03% (4/197) 2.58 0.004752 0.035696
GO:0009117 nucleotide metabolic process 2.03% (4/197) 2.6 0.004549 0.035839
GO:0140096 catalytic activity, acting on a protein 6.09% (12/197) 1.27 0.004669 0.035907
GO:0055086 nucleobase-containing small molecule metabolic process 2.03% (4/197) 2.51 0.005625 0.04129
GO:0110165 cellular anatomical entity 9.14% (18/197) 0.95 0.006033 0.043303
GO:0004175 endopeptidase activity 1.52% (3/197) 3.01 0.00633 0.044448
GO:0016020 membrane 5.58% (11/197) 1.26 0.007049 0.048443
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_97 0.037 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_100 0.032 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_246 0.045 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_265 0.022 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_139 0.033 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_214 0.037 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_197 0.015 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_91 0.05 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_229 0.019 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_257 0.018 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_32 0.017 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_95 0.025 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_72 0.023 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_58 0.019 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_106 0.02 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_115 0.017 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_20 0.017 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_49 0.017 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_98 0.015 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_126 0.019 OrthoFinder output from all 47 species Compare
Sequences (197) (download table)

InterPro Domains

GO Terms

Family Terms