Coexpression cluster: Cluster_363 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0140098 catalytic activity, acting on RNA 7.02% (4/57) 4.61 2.4e-05 0.004141
GO:0140640 catalytic activity, acting on a nucleic acid 7.02% (4/57) 4.08 9.8e-05 0.008601
GO:0009145 purine nucleoside triphosphate biosynthetic process 3.51% (2/57) 4.48 0.003715 0.029554
GO:0009142 nucleoside triphosphate biosynthetic process 3.51% (2/57) 4.48 0.003715 0.029554
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 3.51% (2/57) 4.48 0.003715 0.029554
GO:0006754 ATP biosynthetic process 3.51% (2/57) 4.48 0.003715 0.029554
GO:0009201 ribonucleoside triphosphate biosynthetic process 3.51% (2/57) 4.48 0.003715 0.029554
GO:0009152 purine ribonucleotide biosynthetic process 3.51% (2/57) 4.33 0.004569 0.030751
GO:0009260 ribonucleotide biosynthetic process 3.51% (2/57) 4.33 0.004569 0.030751
GO:0046390 ribose phosphate biosynthetic process 3.51% (2/57) 4.33 0.004569 0.030751
GO:0004540 ribonuclease activity 3.51% (2/57) 5.16 0.001476 0.032281
GO:0008174 mRNA methyltransferase activity 1.75% (1/57) 9.57 0.001312 0.032803
GO:1901362 organic cyclic compound biosynthetic process 5.26% (3/57) 3.2 0.004382 0.033343
GO:0072522 purine-containing compound biosynthetic process 3.51% (2/57) 4.16 0.005718 0.034502
GO:0003968 RNA-dependent RNA polymerase activity 1.75% (1/57) 7.16 0.006978 0.034892
GO:0098800 inner mitochondrial membrane protein complex 3.51% (2/57) 4.12 0.006023 0.035136
GO:0006139 nucleobase-containing compound metabolic process 7.02% (4/57) 2.49 0.005678 0.035486
GO:1901137 carbohydrate derivative biosynthetic process 3.51% (2/57) 4.01 0.006937 0.035707
GO:0046483 heterocycle metabolic process 7.02% (4/57) 2.37 0.007494 0.036429
GO:0006164 purine nucleotide biosynthetic process 3.51% (2/57) 4.17 0.005632 0.036501
GO:0098798 mitochondrial protein-containing complex 3.51% (2/57) 4.02 0.00689 0.036539
GO:0006725 cellular aromatic compound metabolic process 7.02% (4/57) 2.36 0.00782 0.036986
GO:0009165 nucleotide biosynthetic process 3.51% (2/57) 4.03 0.006796 0.037168
GO:1901293 nucleoside phosphate biosynthetic process 3.51% (2/57) 4.03 0.006796 0.037168
GO:0015986 proton motive force-driven ATP synthesis 3.51% (2/57) 4.49 0.00368 0.037884
GO:0004519 endonuclease activity 3.51% (2/57) 5.25 0.001299 0.037895
GO:0004197 cysteine-type endopeptidase activity 1.75% (1/57) 8.35 0.003059 0.038237
GO:0018130 heterocycle biosynthetic process 5.26% (3/57) 3.31 0.003515 0.038443
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 3.51% (2/57) 4.72 0.002667 0.0389
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 3.51% (2/57) 5.35 0.001134 0.039678
GO:1901360 organic cyclic compound metabolic process 7.02% (4/57) 2.31 0.008675 0.039951
GO:0019438 aromatic compound biosynthetic process 5.26% (3/57) 3.32 0.003458 0.040346
GO:0004518 nuclease activity 3.51% (2/57) 4.63 0.003009 0.040508
GO:0016556 mRNA modification 1.75% (1/57) 8.57 0.002623 0.041723
GO:0080009 mRNA methylation 1.75% (1/57) 8.57 0.002623 0.041723
GO:0001510 RNA methylation 1.75% (1/57) 6.51 0.010883 0.042322
GO:0030286 dynein complex 1.75% (1/57) 6.51 0.010883 0.042322
GO:0003723 RNA binding 7.02% (4/57) 2.21 0.011142 0.042388
GO:0009144 purine nucleoside triphosphate metabolic process 3.51% (2/57) 3.71 0.010365 0.043187
GO:0009205 purine ribonucleoside triphosphate metabolic process 3.51% (2/57) 3.71 0.010365 0.043187
GO:0009199 ribonucleoside triphosphate metabolic process 3.51% (2/57) 3.71 0.010365 0.043187
GO:0046034 ATP metabolic process 3.51% (2/57) 3.71 0.010365 0.043187
GO:0034654 nucleobase-containing compound biosynthetic process 5.26% (3/57) 3.54 0.002266 0.044063
GO:0009141 nucleoside triphosphate metabolic process 3.51% (2/57) 3.67 0.01088 0.044278
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) 3.51% (2/57) 5.42 0.001036 0.045312
GO:0090407 organophosphate biosynthetic process 3.51% (2/57) 3.55 0.0128 0.046668
GO:0005875 microtubule associated complex 1.75% (1/57) 6.3 0.012613 0.046964
GO:0009150 purine ribonucleotide metabolic process 3.51% (2/57) 3.44 0.014857 0.05
GO:0019693 ribose phosphate metabolic process 3.51% (2/57) 3.44 0.014857 0.05
GO:0009259 ribonucleotide metabolic process 3.51% (2/57) 3.44 0.014857 0.05
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_63 0.02 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_17 0.02 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_21 0.018 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_187 0.026 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_258 0.022 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_293 0.016 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_344 0.03 OrthoFinder output from all 47 species Compare
Angiopteris evecta HCCA Cluster_112 0.018 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_59 0.021 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_221 0.024 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_200 0.031 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_202 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_55 0.096 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_95 0.016 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_207 0.017 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_72 0.029 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_75 0.024 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_82 0.016 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_205 0.026 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_482 0.027 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_50 0.027 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_78 0.016 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_66 0.016 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_173 0.02 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_16 0.015 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_54 0.071 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_71 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_156 0.019 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_232 0.018 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_1 0.022 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_4 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_71 0.051 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_77 0.024 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_78 0.023 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_81 0.05 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_127 0.019 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_133 0.021 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_135 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_205 0.023 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_262 0.028 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_91 0.022 OrthoFinder output from all 47 species Compare
Sequences (57) (download table)

InterPro Domains

GO Terms

Family Terms