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  5. Cba_g43171

Cba_g43171


Description : not classified & original description: none


Gene families : OG0000647 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000647_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g43171
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00203020 GIL1,... Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AMTR_s00029p00203270 GIL1,... No description available 0.07 OrthoFinder output from all 47 species
AT1G53380 No alias Plant protein of unknown function (DUF641) 0.02 OrthoFinder output from all 47 species
Aob_g13805 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.02 OrthoFinder output from all 47 species
Aop_g06991 GIL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14072.t1 Aspi01Gene14072 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G053000.1 Ceric.06G053000 not classified & original description: pacid=50620800... 0.03 OrthoFinder output from all 47 species
Ceric.23G039100.1 Ceric.23G039100 not classified & original description: pacid=50610817... 0.04 OrthoFinder output from all 47 species
Dcu_g12750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024812001 GIL1 Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_22635 No alias regulator (GIL1) of phytochrome-mediated agravitropism 0.03 OrthoFinder output from all 47 species
LOC_Os01g10680.1 LOC_Os01g10680 Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os05g11650.1 LOC_Os05g11650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g36400.1 LOC_Os10g36400 Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007179 No alias not classified & original description: CDS=435-2498 0.04 OrthoFinder output from all 47 species
Smo184343 No alias Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc07g062310.4.1 Solyc07g062310 Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Tin_g23463 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g46128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006224_P001 GIL1, Zm00001e006224 regulator (GIL1) of phytochrome-mediated agravitropism 0.03 OrthoFinder output from all 47 species
Zm00001e031256_P001 Zm00001e031256 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006943 DUF641_pln 21 151
No external refs found!