Cba_g37910 (NEF1)


Aliases : NEF1

Description : exine patterning factor *(NEF1) & original description: none


Gene families : OG0004275 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004275_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g37910

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00233120 NEF1,... Cell wall.sporopollenin.exine wall formation.NEF1 exine... 0.03 OrthoFinder output from all 47 species
Aev_g03387 NEF1 exine patterning factor *(NEF1) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03489 NEF1 exine patterning factor *(NEF1) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01001111001 NEF1 Cell wall.sporopollenin.exine wall formation.NEF1 exine... 0.03 OrthoFinder output from all 47 species
Gb_19950 NEF1 exine patterning factor (NEF1) 0.02 OrthoFinder output from all 47 species
LOC_Os11g32470.1 NEF1, LOC_Os11g32470 exine patterning factor (NEF1) 0.02 OrthoFinder output from all 47 species
MA_302207g0010 NEF1 exine patterning factor (NEF1) 0.03 OrthoFinder output from all 47 species
MA_7735973g0010 NEF1 exine patterning factor (NEF1) 0.02 OrthoFinder output from all 47 species
Ppi_g02407 NEF1 exine patterning factor *(NEF1) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g033282.1.1 NEF1, Solyc11g033282 exine patterning factor (NEF1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!