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  5. Cba_g35826

Cba_g35826


Description : not classified & original description: none


Gene families : OG0000059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g35826

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264290 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00095090 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00245p00017720 evm_27.TU.AmTr_v1... Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G45210 No alias SAUR-like auxin-responsive protein family 0.03 OrthoFinder output from all 47 species
AT4G12410 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
AT4G22620 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
AT4G38860 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
AT5G18050 No alias SAUR-like auxin-responsive protein family 0.03 OrthoFinder output from all 47 species
AT5G18060 No alias SAUR-like auxin-responsive protein family 0.04 OrthoFinder output from all 47 species
AT5G18080 No alias SAUR-like auxin-responsive protein family 0.03 OrthoFinder output from all 47 species
Aev_g48486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26703 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g50992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69836 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40671.t1 Aspi01Gene40671 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42614.t1 Aspi01Gene42614 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G052400.1 Ceric.02G052400 not classified & original description: pacid=50585230... 0.03 OrthoFinder output from all 47 species
Ceric.35G059200.1 Ceric.35G059200 not classified & original description: pacid=50581287... 0.05 OrthoFinder output from all 47 species
Dac_g22871 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_02938 No alias Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_12165 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_18130 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_29894 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_39704 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g56240.1 LOC_Os01g56240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g52990.1 LOC_Os02g52990 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g45800.1 LOC_Os03g45800 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g48860.1 LOC_Os06g48860 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10433051g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_17902g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_2280g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_40440g0010 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_91102g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_94838g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g02630 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g056440.3.1 Solyc05g056440 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g053260.1.1 Solyc06g053260 Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc07g066560.1.1 Solyc07g066560 Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g05510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005212_P001 Zm00001e005212 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e014637_P001 Zm00001e014637 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e018791_P001 Zm00001e018791 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e037770_P001 Zm00001e037770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003676 SAUR_fam 163 230
No external refs found!