Cba_g32439 (GLR3.6, ATGLR3.6)

Aliases : GLR3.6, ATGLR3.6

Description : ligand-gated cation channel *(GLR) & original description: none

Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g32439

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00179820	GLR2.2,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AMTR_s00019p00180640	GLR2.8,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AMTR_s00019p00182440	GLR2.8,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AMTR_s00019p00182630	GLR2.7,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00023p00244390	GLR2.7,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00062p00055860	GLR3.3,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
AT2G24720	GLR2.2, ATGLR2.2	glutamate receptor 2.2	0.02	OrthoFinder output from all 47 species
AT2G29100	ATGLR2.9, GLR2.9	glutamate receptor 2.9	0.03	OrthoFinder output from all 47 species
AT2G29110	GLR2.8, ATGLR2.8	glutamate receptor 2.8	0.02	OrthoFinder output from all 47 species
AT2G29120	GLR2.7, ATGLR2.7	glutamate receptor 2.7	0.02	OrthoFinder output from all 47 species
AT4G31710	GLR2.4, ATGLR2.4	glutamate receptor 2.4	0.02	OrthoFinder output from all 47 species
AT5G11180	ATGLR2.6, GLR2.6	glutamate receptor 2.6	0.03	OrthoFinder output from all 47 species
AT5G11210	GLR2.5, ATGLR2.5	glutamate receptor 2.5	0.04	OrthoFinder output from all 47 species
AT5G27100	GLR2.1, ATGLR2.1	glutamate receptor 2.1	0.03	OrthoFinder output from all 47 species
AT5G48400	ATGLR1.2, GLR1.2	Glutamate receptor family protein	0.03	OrthoFinder output from all 47 species
AT5G48410	ATGLR1.3, GLR1.3	glutamate receptor 1.3	0.03	OrthoFinder output from all 47 species
Als_g38109	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene64327.t1	ATGLR3.5, GLR6,...	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene64327.t2	ATGLR3.5, GLR6,...	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0038.g026158	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.01G008500.1	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original...	0.02	OrthoFinder output from all 47 species
Ceric.01G024600.1	GLUR3, GLR3.4,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.28G068100.1	GLUR3, GLR3.4,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Dde_g23222	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g02879	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01022297001	GLR3.6, ATGLR3.6	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
GSVIVT01023870001	ATGLR3.2,...	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
GSVIVT01030600001	GLR3.7, ATGLR3.7, GLR5	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
GSVIVT01033121001	GLR2.7, ATGLR2.7	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
GSVIVT01033132001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
GSVIVT01033160001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
Gb_06329	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Gb_06331	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
Gb_28362	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Gb_39753	GLR2.7, ATGLR2.7	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
LOC_Os02g54640.1	ATGLR2.9,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
LOC_Os06g09050.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
LOC_Os07g01310.1	GLUR3, GLR3.4,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
LOC_Os07g33790.1	GLUR3, GLR3.4,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
Len_g39997	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
MA_103602g0010	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
MA_10428186g0020	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_10429132g0010	ATGLR3.1, GLR2,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
MA_212254g0010	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
MA_339780g0010	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
MA_46902g0010	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
MA_6222576g0010	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Ore_g28545	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005895	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original...	0.02	OrthoFinder output from all 47 species
Sam_g26653	No alias	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g078860.4.1	ATGLR2.9,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Solyc06g063180.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
Solyc08g006500.4.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Spa_g09957	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e009847_P001	GLR2.8,...	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001638	Solute-binding_3/MltF_N	539	858
IPR001828	ANF_lig-bd_rcpt	55	419
IPR001320	Iontro_rcpt_C	859	887

External Links

No external refs found!

Cba_g32439 (GLR3.6, ATGLR3.6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation