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  5. Cba_g32164

Cba_g32164 (ATH12, ATATH12)


Aliases : ATH12, ATATH12

Description : subfamily ABCB transporter & original description: none


Gene families : OG0008303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g32164
Cluster HCCA: Cluster_297

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0084.g038923 ATH12, ATATH12 subfamily ABCB transporter & original description: CDS=299-2428 0.04 OrthoFinder output from all 47 species
Ceric.25G048800.1 ATH12, ATATH12,... subfamily ABCB transporter & original description:... 0.02 OrthoFinder output from all 47 species
LOC_Os04g33700.1 ATH12, ATATH12,... subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 118 383
IPR003439 ABC_transporter-like_ATP-bd 447 598
No external refs found!