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  5. Cba_g29136

Cba_g29136


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000875_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g29136

Target Alias Description ECC score Gene Family Method Actions
AT2G43060 IBH1 ILI1 binding bHLH 1 0.03 OrthoFinder output from all 47 species
AT3G06590 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G30410 No alias sequence-specific DNA binding transcription factors 0.02 OrthoFinder output from all 47 species
Als_g00479 IBH1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14908 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023743001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os03g19780.1 LOC_Os03g19780 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os06g44320.1 LOC_Os06g44320 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Lfl_g06475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_102253g0010 No alias transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
MA_136773g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_29054g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_44257g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_66021g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc01g079270.1.1 UPB1, Solyc01g079270 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc07g006310.1.1 Solyc07g006310 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc12g042010.1.1 Solyc12g042010 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e001479_P001 Zm00001e001479 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003876 AMP deaminase activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032261 purine nucleotide salvage IEP HCCA
BP GO:0032264 IMP salvage IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043101 purine-containing compound salvage IEP HCCA
BP GO:0043173 nucleotide salvage IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0047623 adenosine-phosphate deaminase activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:0106380 purine ribonucleotide salvage IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!