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Description : not classified & original description: none
Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g27489 | |
| Cluster | HCCA: Cluster_51 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00017p00257160 | PUB26,... | U-box domain-containing protein 25 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AT3G02840 | No alias | ARM repeat superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| AT3G19380 | PUB25 | plant U-box 25 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G09800 | No alias | ARM repeat superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G64660 | CMPG2, ATCMPG2 | CYS, MET, PRO, and GLY protein 2 | 0.06 | OrthoFinder output from all 47 species | |
| AT5G65920 | No alias | ARM repeat superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g003285 | PUB25 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g014414 | PUB25 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g077175 | PUB26 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g02169 | PUB23 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g18167 | PUB26 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g21197 | PUB25 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g02187 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06990 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g20026 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g10929 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Als_g37093 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g12417 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g16033 | PUB23 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g20185 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g34288 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g04412 | PUB23 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene18444.t1 | PUB23, Aspi01Gene18444 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene18451.t1 | PUB25, Aspi01Gene18451 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene44311.t1 | PUB22, Aspi01Gene44311 | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aspi01Gene51615.t1 | PUB15, Aspi01Gene51615 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g42548 | PUB25 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G007700.1 | PUB23, Ceric.10G007700 | not classified & original description: pacid=50612519... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g01209 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g01521 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04484 | PUB25 | E3 ubiquitin ligase & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g04516 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g11691 | PUB26 | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Dcu_g46168 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03660 | PUB23 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g14303 | PUB25 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_02628 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_02635 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_16227 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_26429 | PUB26 | U-box domain-containing protein 26 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g64570.1 | PUB23, LOC_Os01g64570 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g33680.1 | CMPG2, ATCMPG2,... | U-box domain-containing protein 29 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g34410.1 | PUB25, LOC_Os02g34410 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g50460.1 | LOC_Os02g50460 | U-box domain-containing protein 20 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g13740.1 | LOC_Os03g13740 | U-box domain-containing protein 20 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g13870.1 | LOC_Os06g13870 | U-box domain-containing protein 21 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g16219 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g31416 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10425865g0010 | PUB25 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| MA_10432813g0010 | PUB22 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_1663g0020 | PUB25 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_311559g0010 | PUB22 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_33190g0010 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_48004g0010 | No alias | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_481299g0010 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_5536318g0010 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| MA_58844g0020 | PUB22 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_6335g0010 | CMPG2, ATCMPG2 | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| MA_83739g0020 | PUB26 | U-box domain-containing protein 26 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_8837995g0010 | PUB26 | U-box domain-containing protein 26 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_95662g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g06090.1 | PUB25 | E3 ubiquitin ligase (PUB) | 0.01 | OrthoFinder output from all 47 species | |
| Mp3g11730.1 | PUB25 | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g22740.1 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g22750.1 | PUB26 | U-box domain-containing protein 26 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
| Mp7g11000.1 | PUB25 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g11020.1 | PUB25 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g06628 | PUB25 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g09373 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g08919 | PUB25 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g08920 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g08921 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g15868 | PUB23 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g21834 | PUB25 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29206 | PUB25 | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g29544 | PUB23 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36530 | PUB23 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42463 | PUB23 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g15316 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g19356 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g19522 | PUB26 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g18199 | PUB23 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo416356 | PUB26 | U-box domain-containing protein 30 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| Smo426053 | PUB26 | U-box domain-containing protein 26 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g005160.4.1 | Solyc01g005160 | U-box domain-containing protein 21 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g007000.4.1 | PUB22, Solyc01g007000 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g007010.2.1 | PUB22, Solyc01g007010 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g007020.4.1 | PUB23, Solyc01g007020 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g007030.3.1 | PUB22, Solyc01g007030 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g007040.4.1 | PUB22, Solyc01g007040 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g107980.3.1 | PUB26, Solyc01g107980 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g071030.1.1 | Solyc04g071030 | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc05g056500.1.1 | PUB26, Solyc05g056500 | U-box domain-containing protein 26 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g074140.1.1 | PUB24, Solyc06g074140 | E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g068920.1.1 | PUB23, Solyc11g068920 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g068940.1.1 | PUB24, Solyc11g068940 | E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03410 | PUB26 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e000999_P001 | Zm00001e000999 | U-box domain-containing protein 20 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e006484_P001 | PUB23, Zm00001e006484 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e014766_P001 | CMPG2, ATCMPG2,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014779_P001 | PUB26, Zm00001e014779 | U-box domain-containing protein 26 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e022679_P001 | CMPG2, ATCMPG2,... | U-box domain-containing protein 29 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e022698_P001 | PUB26, Zm00001e022698 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e036030_P001 | Zm00001e036030 | U-box domain-containing protein 21 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |