Cba_g25631


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g25631
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Adi_g050830 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08051 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09478 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0506.g073955 AT-GT2, GT2 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G053100.1 Ceric.26G053100 Trihelix-type transcription factor & original... 0.06 OrthoFinder output from all 47 species
Ehy_g24778 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01026588001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
MA_331768g0020 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
MA_79619g0010 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Msp_g35869 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08779 No alias Trihelix-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g36845 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16876 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04670 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018240 AT-GT2, GT2 Trihelix-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023745 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 246 332
IPR044822 Myb_DNA-bind_4 579 666
No external refs found!