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  5. Lfl_g33011

Lfl_g33011


Description : not classified & original description: none


Gene families : OG0002372 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002372_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g33011

Target Alias Description ECC score Gene Family Method Actions
Adi_g003214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g051123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33549 MEF19 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68075 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43203 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43228 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50233 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33040 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g10606 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33944 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32623 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58531 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48804 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49147 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55945 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28102 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000175 3'-5'-exoribonuclease activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004532 exoribonuclease activity IEP HCCA
MF GO:0004535 poly(A)-specific ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 172 219
No external refs found!