Cba_g21293

Description : component *(eL22) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000996 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000996_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g21293
Cluster	HCCA: Cluster_54

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00189250	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AT3G05560	No alias	Ribosomal L22e protein family	0.06	OrthoFinder output from all 47 species
AT5G27770	No alias	Ribosomal L22e protein family	0.03	OrthoFinder output from all 47 species
Adi_g062074	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Adi_g103620	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Als_g19592	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.1	OrthoFinder output from all 47 species
Als_g24279	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.11	OrthoFinder output from all 47 species
Als_g38436	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Aob_g15050	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Aop_g10541	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g22540	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g24260	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Aop_g36669	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Azfi_s0005.g009357	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cba_g63209	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.08G045600.1	Ceric.08G045600	component *(eL22) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Ceric.26G014800.1	Ceric.26G014800	component *(eL22) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001206.7	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
Cre07.g357850	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Dac_g04863	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dac_g27123	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Dcu_g27968	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
GSVIVT01028021001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
GSVIVT01031158001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
GSVIVT01035141001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Gb_08874	No alias	component RPL22 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Gb_36164	No alias	component RPL22 of LSU proteome component	0.04	OrthoFinder output from all 47 species
LOC_Os03g22340.1	LOC_Os03g22340	component RPL22 of LSU proteome component	0.03	OrthoFinder output from all 47 species
MA_130453g0010	No alias	component RPL22 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Mp4g02920.1	No alias	component RPL22 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Msp_g03306	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Pir_g03911	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Pp3c11_630V3.1	Pp3c11_630	Ribosomal L22e protein family	0.03	OrthoFinder output from all 47 species
Pp3c1_120V3.1	Pp3c1_120	Ribosomal L22e protein family	0.04	OrthoFinder output from all 47 species
Pp3c2_28500V3.1	Pp3c2_28500	Ribosomal L22e protein family	0.04	OrthoFinder output from all 47 species
Pp3c2_28510V3.1	Pp3c2_28510	Ribosomal L22e protein family	0.04	OrthoFinder output from all 47 species
Ppi_g23306	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ppi_g33837	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0197.g025519	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g13724	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g30822	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g46506	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Sam_g47525	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Solyc01g099830.3.1	Solyc01g099830	component RPL22 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Solyc09g075150.3.1	Solyc09g075150	component RPL22 of LSU proteome component	0.04	OrthoFinder output from all 47 species
Solyc09g075155.1.1	Solyc09g075155	component RPL22 of LSU proteome component	0.07	OrthoFinder output from all 47 species
Spa_g22846	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Spa_g33994	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Spa_g42689	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Tin_g36488	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002671	Ribosomal_L22e	17	123

External Links

No external refs found!

Cba_g21293

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation