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Aliases : EMB2758
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00077p00031710 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G22150 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G57430 | OTP84 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g068804 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g069197 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g099087 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g12197 | OSB1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g20571 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g21708 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g03960 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g08515 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g12481 | OTP82 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g17265 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g24223 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g35854 | REME1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g38002 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g04279 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g30646 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g06037 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g04000 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g14571 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g25195 | EMB2758 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g70660 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene02296.t1 | Aspi01Gene02296 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene28610.t1 | REME1, Aspi01Gene28610 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0032.g024769 | OTP84 | not classified & original description: CDS=1-2910 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0082.g038719 | No alias | not classified & original description: CDS=1-2307 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0119.g046740 | No alias | not classified & original description: CDS=1-2259 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g06508 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g31308 | REME1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g34918 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g35519 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g75325 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.02G028200.1 | OTP84, Ceric.02G028200 | not classified & original description: pacid=50583866... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.17G033700.1 | VAC1, ECB2,... | not classified & original description: pacid=50617387... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.20G006900.1 | Ceric.20G006900 | not classified & original description: pacid=50565918... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.23G032000.1 | Ceric.23G032000 | not classified & original description: pacid=50611416... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.23G082400.1 | CRR22, Ceric.23G082400 | not classified & original description: pacid=50611294... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.27G011400.1 | Ceric.27G011400 | not classified & original description: pacid=50605728... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G042700.1 | Ceric.32G042700 | not classified & original description: pacid=50598057... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g12138 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g35515 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g04093 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g07762 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g10089 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g47920 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g22114 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g22598 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g25739 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g46522 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g16282 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g29034 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01009227001 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01031251001 | LPA66 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g50280.1 | CRR22, LOC_Os02g50280 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g44210.2 | LOC_Os03g44210 | RNA editing factor (SEL1/PDM1) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g39410.1 | OTP86, LOC_Os04g39410 | RNA editing factor (OTP86) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g51350.1 | LOC_Os04g51350 | RNA editing factor (AEF1) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os05g50950.1 | LOC_Os05g50950 | Pentatricopeptide repeat-containing protein At4g01030,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g02280.1 | LOC_Os07g02280 | RNA editing factor (OTP80) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g17530.2 | LOC_Os11g17530 | Pentatricopeptide repeat-containing protein At2g37320... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g23812 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Len_g27027 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g54960 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g07700 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07821 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_653417g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_72886g0010 | No alias | Pentatricopeptide repeat-containing protein At5g50390,... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g28728 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g41084 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g11470 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g13575 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g22679 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g28128 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g39306 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g41047 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g43611 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g05223 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g19965 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g23074 | LPA66 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g01154 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07362 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g40202 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g53567 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g57818 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g58117 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003208 | No alias | monogalactosyldiacylglycerol lipase *(HIL1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005856 | No alias | not classified & original description: CDS=1-2292 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005911 | EMB2758 | not classified & original description: CDS=1-2163 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g076800.3.1 | CRR22, Solyc04g076800 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g076150.4.1 | Solyc08g076150 | Pentatricopeptide repeat-containing protein At1g31920... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07054 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g28071 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g50449 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g52240 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g03655 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g17413 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g21292 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g23253 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g26720 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g44203 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e002552_P001 | Zm00001e002552 | RNA editing factor (SEL1/PDM1) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e039026_P001 | OTP82, Zm00001e039026 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071586 | CAAX-box protein processing | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 490 | 512 |
| IPR002885 | Pentatricopeptide_repeat | 150 | 172 |
| IPR002885 | Pentatricopeptide_repeat | 279 | 309 |
| IPR002885 | Pentatricopeptide_repeat | 178 | 204 |
| IPR002885 | Pentatricopeptide_repeat | 251 | 275 |
| IPR002885 | Pentatricopeptide_repeat | 50 | 71 |
| IPR002885 | Pentatricopeptide_repeat | 386 | 413 |
| IPR002885 | Pentatricopeptide_repeat | 78 | 107 |
| IPR002885 | Pentatricopeptide_repeat | 414 | 461 |
| IPR002885 | Pentatricopeptide_repeat | 311 | 358 |
| No external refs found! |