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  5. Cba_g20818

Cba_g20818


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0001565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20818

Target Alias Description ECC score Gene Family Method Actions
Als_g00818 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04936 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12314 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23009 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03012 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04159 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07585 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01344 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g35610 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g06866 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_10426883g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000346 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005597 No alias Trihelix-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021797 No alias Trihelix-type transcription factor & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 30 118
No external refs found!