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Cba_g20079 (FdC1)


Aliases : FdC1

Description : ferredoxin targeted to non-NADP reduction & original description: none


Gene families : OG0007770 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007770_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g20079
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00150380 FdC1,... Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G32550 FdC1 2Fe-2S ferredoxin-like superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g043788 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Aob_g00791 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.09 OrthoFinder output from all 47 species
Ceric.13G044700.1 FdC1, Ceric.13G044700 ferredoxin targeted to non-NADP reduction & original... 0.06 OrthoFinder output from all 47 species
Dac_g00249 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Dcu_g00557 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Ehy_g02045 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01013191001 FdC1 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
LOC_Os03g48040.1 FdC1, LOC_Os03g48040 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g02653 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Mp2g18370.1 FdC1 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g10671 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Pnu_g00351 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Ppi_g18540 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009549 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Sam_g25831 No alias ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Zm00001e012273_P001 FdC1, Zm00001e012273 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 79 145
No external refs found!