Cba_g19010 (PLSP1)

Aliases : PLSP1

Description : plastidic signal peptidase *(PLSP/TPP) & original description: none

Gene families : OG0000723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000723_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g19010
Cluster	HCCA: Cluster_49

Target	Alias	Description	ECC score	Gene Family Method
AT3G24590	PLSP1	plastidic type i signal peptidase 1	0.06	OrthoFinder output from all 47 species
Ala_g01598	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.03	OrthoFinder output from all 47 species
Als_g21840	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.06	OrthoFinder output from all 47 species
Ceric.10G075600.1	PLSP1, Ceric.10G075600	plastidic signal peptidase *(PLSP/TPP) & original...	0.02	OrthoFinder output from all 47 species
Cre07.g344350	PLSP1	Protein modification.peptide maturation.plastid.PLSP/TPP...	0.02	OrthoFinder output from all 47 species
Dcu_g18387	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.04	OrthoFinder output from all 47 species
LOC_Os02g16709.1	PLSP1, LOC_Os02g16709	plastidic signal peptidase (PLSP/TPP)	0.02	OrthoFinder output from all 47 species
Ore_g19818	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.02	OrthoFinder output from all 47 species
Smo47339	PLSP1	Protein modification.peptide maturation.plastid.PLSP/TPP...	0.04	OrthoFinder output from all 47 species
Solyc12g007120.2.1	PLSP1, Solyc12g007120	plastidic signal peptidase (PLSP/TPP)	0.03	OrthoFinder output from all 47 species
Spa_g48994	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.03	OrthoFinder output from all 47 species
Tin_g15463	PLSP1	plastidic signal peptidase *(PLSP/TPP) & original...	0.03	OrthoFinder output from all 47 species
Zm00001e014232_P002	PLSP1, Zm00001e014232	plastidic signal peptidase (PLSP/TPP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004252	serine-type endopeptidase activity	IEA	Interproscan
BP	GO:0006465	signal peptide processing	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008236	serine-type peptidase activity	None	Extended
BP	GO:0016485	protein processing	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051604	protein maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003697	single-stranded DNA binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019533	Peptidase_S26	146	303

External Links

No external refs found!

Cba_g19010 (PLSP1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation