Cba_g18540 (ATHSF1, HSF1, HSFA1A, ATHSFA1A)


Aliases : ATHSF1, HSF1, HSFA1A, ATHSFA1A

Description : HSF-type transcription factor & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g18540

Target Alias Description ECC score Gene Family Method Actions
Ala_g13109 ATHSF1, HSF1,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03227.t1 HSFB4, SCZ,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44843 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12135 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12218 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13363 HSFA1E, ATHSFA1E HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19089 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32244 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020490_P001 AT-HSFA6B,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0018142 protein-DNA covalent cross-linking IEP HCCA
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 132 221
No external refs found!