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  5. Cba_g18539

Cba_g18539


Description : EC_1.1 oxidoreductase acting on CH-OH group of donor & original description: none


Gene families : OG0000323 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000323_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g18539

Target Alias Description ECC score Gene Family Method Actions
Adi_g082554 HSD1, ATHSD1 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Aev_g02981 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aev_g16067 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aop_g16763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20431 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18942.t1 Aspi01Gene18942 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene69504.t1 Aspi01Gene69504 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Cre17.g702750 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g09776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12120 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Dde_g01005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06710 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Dde_g10076 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Dde_g25756 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Ehy_g00857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00877 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
LOC_Os02g47350.1 LOC_Os02g47350 ketosphinganine reductase 0.02 OrthoFinder output from all 47 species
Len_g12464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13232 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429850g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_29607g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_66037g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_776612g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9332825g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g10554 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.05 OrthoFinder output from all 47 species
Ore_g32189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g58701 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Ppi_g31214 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Spa_g17382 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.04 OrthoFinder output from all 47 species
Spa_g28867 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 42 241
No external refs found!