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  5. Cba_g17298

Cba_g17298


Description : EC_6.3 ligase forming carbon-nitrogen bond & original description: none


Gene families : OG0004040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17298

Target Alias Description ECC score Gene Family Method Actions
Ala_g11918 No alias EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008387 No alias EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.16G081100.1 Ceric.16G081100 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Gb_09664 No alias Glutamine-dependent NAD(+) synthetase OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pir_g09675 No alias EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Sam_g04261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16384 No alias EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006807 nitrogen compound metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0044599 AP-5 adaptor complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR003010 C-N_Hydrolase 5 281
IPR022310 NAD/GMP_synthase 339 601
No external refs found!