1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g17129

Cba_g17129


Description : not classified & original description: none


Gene families : OG0002274 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002274_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g17129
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00024940 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00078p00195500 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Als_g01063 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19739 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene34438.t1 Aspi01Gene34438 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31734 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g09268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015418001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01029029001 No alias No description available 0.02 OrthoFinder output from all 47 species
Msp_g01593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02984 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g17902 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005018 No alias not classified & original description: CDS=1-1431 0.06 OrthoFinder output from all 47 species
Sam_g19211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g48933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g091200.3.1 Solyc09g091200 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g11187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29514 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g04636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005016 TDE1/TMS 34 326
IPR005016 TDE1/TMS 332 411
No external refs found!